Gene : Lsat_1_v5_gn_2_86320 L. sativa V8
Defline:  (1 of 1) PTHR31209//PTHR31209:SF0 - FAMILY NOT NAMED // COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE Genomic Order:  2429
Name:  ? Lsat_1_v5_gn_2_86320 Secondary Identifier:  ? PAC:38959507
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLUCONEO-PWY Lactuca sativa pathologic  
Lsativa PWY-1042 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa PWY-5723 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_86320 0.5kb upstream 0.5kb upstream 3276   true Lsat_1_v8_lg_2: 164877920-164881195 Lactuca sativa
Lsat_1_v5_gn_2_86320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 164880696-164881195 Lactuca sativa
Lsat_1_v5_gn_2_86320 0.5kb downstream 0.5kb downstream 3276   true Lsat_1_v8_lg_2: 164877420-164880695 Lactuca sativa
Lsat_1_v5_gn_2_86320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 164877420-164877919 Lactuca sativa
Lsat_1_v5_gn_2_86320 1.0kb upstream 1.0kb upstream 3776   true Lsat_1_v8_lg_2: 164877920-164881695 Lactuca sativa
Lsat_1_v5_gn_2_86320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 164880696-164881695 Lactuca sativa
Lsat_1_v5_gn_2_86320 1.0kb downstream 1.0kb downstream 3776   true Lsat_1_v8_lg_2: 164876920-164880695 Lactuca sativa
Lsat_1_v5_gn_2_86320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 164876920-164877919 Lactuca sativa
Lsat_1_v5_gn_2_86320 2.0kb upstream 2.0kb upstream 4776   true Lsat_1_v8_lg_2: 164877920-164882695 Lactuca sativa
Lsat_1_v5_gn_2_86320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 164880696-164882695 Lactuca sativa
Lsat_1_v5_gn_2_86320 2.0kb downstream 2.0kb downstream 4776   true Lsat_1_v8_lg_2: 164875920-164880695 Lactuca sativa
Lsat_1_v5_gn_2_86320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 164875920-164877919 Lactuca sativa
Lsat_1_v5_gn_2_86320 5.0kb upstream 5.0kb upstream 7776   true Lsat_1_v8_lg_2: 164877920-164885695 Lactuca sativa
Lsat_1_v5_gn_2_86320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 164880696-164885695 Lactuca sativa
Lsat_1_v5_gn_2_86320 5.0kb downstream 5.0kb downstream 7776   true Lsat_1_v8_lg_2: 164872920-164880695 Lactuca sativa
Lsat_1_v5_gn_2_86320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 164872920-164877919 Lactuca sativa
Lsat_1_v5_gn_2_86320 10.0kb upstream 10.0kb upstream 12776   true Lsat_1_v8_lg_2: 164877920-164890695 Lactuca sativa
Lsat_1_v5_gn_2_86320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 164880696-164890695 Lactuca sativa
Lsat_1_v5_gn_2_86320 10.0kb downstream 10.0kb downstream 12776   true Lsat_1_v8_lg_2: 164867920-164880695 Lactuca sativa
Lsat_1_v5_gn_2_86320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 164867920-164877919 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472119 5263 Asterids View MSA
123752475 5271 Pentapetalae View MSA
122786354 5272 Eudicot View MSA
122046055 5273 Angiosperm View MSA
121343817 5274 Embryophyte View MSA
123428865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain