Gene : Lsat_1_v5_gn_2_90040 L. sativa V8
Defline:  (1 of 5) PTHR22811//PTHR22811:SF47 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // EMP24/GP25L/P24 FAMILY/GOLD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2469
Name:  ? Lsat_1_v5_gn_2_90040 Secondary Identifier:  ? PAC:38963267
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_90040 0.5kb upstream 0.5kb upstream 3179   true Lsat_1_v8_lg_2: 166023292-166026470 Lactuca sativa
Lsat_1_v5_gn_2_90040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 166023292-166023791 Lactuca sativa
Lsat_1_v5_gn_2_90040 0.5kb downstream 0.5kb downstream 3179   true Lsat_1_v8_lg_2: 166023792-166026970 Lactuca sativa
Lsat_1_v5_gn_2_90040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 166026471-166026970 Lactuca sativa
Lsat_1_v5_gn_2_90040 1.0kb upstream 1.0kb upstream 3679   true Lsat_1_v8_lg_2: 166022792-166026470 Lactuca sativa
Lsat_1_v5_gn_2_90040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 166022792-166023791 Lactuca sativa
Lsat_1_v5_gn_2_90040 1.0kb downstream 1.0kb downstream 3679   true Lsat_1_v8_lg_2: 166023792-166027470 Lactuca sativa
Lsat_1_v5_gn_2_90040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 166026471-166027470 Lactuca sativa
Lsat_1_v5_gn_2_90040 2.0kb upstream 2.0kb upstream 4679   true Lsat_1_v8_lg_2: 166021792-166026470 Lactuca sativa
Lsat_1_v5_gn_2_90040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 166021792-166023791 Lactuca sativa
Lsat_1_v5_gn_2_90040 2.0kb downstream 2.0kb downstream 4679   true Lsat_1_v8_lg_2: 166023792-166028470 Lactuca sativa
Lsat_1_v5_gn_2_90040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 166026471-166028470 Lactuca sativa
Lsat_1_v5_gn_2_90040 5.0kb upstream 5.0kb upstream 7679   true Lsat_1_v8_lg_2: 166018792-166026470 Lactuca sativa
Lsat_1_v5_gn_2_90040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 166018792-166023791 Lactuca sativa
Lsat_1_v5_gn_2_90040 5.0kb downstream 5.0kb downstream 7679   true Lsat_1_v8_lg_2: 166023792-166031470 Lactuca sativa
Lsat_1_v5_gn_2_90040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 166026471-166031470 Lactuca sativa
Lsat_1_v5_gn_2_90040 10.0kb upstream 10.0kb upstream 12679   true Lsat_1_v8_lg_2: 166013792-166026470 Lactuca sativa
Lsat_1_v5_gn_2_90040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 166013792-166023791 Lactuca sativa
Lsat_1_v5_gn_2_90040 10.0kb downstream 10.0kb downstream 12679   true Lsat_1_v8_lg_2: 166023792-166036470 Lactuca sativa
Lsat_1_v5_gn_2_90040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 166026471-166036470 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464997 5263 Asterids View MSA
123742196 5271 Pentapetalae View MSA
122791106 5272 Eudicot View MSA
122049810 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain