Gene : Lsat_1_v5_gn_2_92701 L. sativa V8
Defline:  (1 of 1) PTHR15141//PTHR15141:SF51//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // SUBFAMILY NOT NAMED // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Genomic Order:  2581
Name:  ? Lsat_1_v5_gn_2_92701 Secondary Identifier:  ? PAC:38958448
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_92701 0.5kb upstream 0.5kb upstream 6613   true Lsat_1_v8_lg_2: 168920014-168926626 Lactuca sativa
Lsat_1_v5_gn_2_92701 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 168920014-168920513 Lactuca sativa
Lsat_1_v5_gn_2_92701 0.5kb downstream 0.5kb downstream 6613   true Lsat_1_v8_lg_2: 168920514-168927126 Lactuca sativa
Lsat_1_v5_gn_2_92701 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 168926627-168927126 Lactuca sativa
Lsat_1_v5_gn_2_92701 1.0kb upstream 1.0kb upstream 7113   true Lsat_1_v8_lg_2: 168919514-168926626 Lactuca sativa
Lsat_1_v5_gn_2_92701 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 168919514-168920513 Lactuca sativa
Lsat_1_v5_gn_2_92701 1.0kb downstream 1.0kb downstream 7113   true Lsat_1_v8_lg_2: 168920514-168927626 Lactuca sativa
Lsat_1_v5_gn_2_92701 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 168926627-168927626 Lactuca sativa
Lsat_1_v5_gn_2_92701 2.0kb upstream 2.0kb upstream 8113   true Lsat_1_v8_lg_2: 168918514-168926626 Lactuca sativa
Lsat_1_v5_gn_2_92701 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 168918514-168920513 Lactuca sativa
Lsat_1_v5_gn_2_92701 2.0kb downstream 2.0kb downstream 8113   true Lsat_1_v8_lg_2: 168920514-168928626 Lactuca sativa
Lsat_1_v5_gn_2_92701 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 168926627-168928626 Lactuca sativa
Lsat_1_v5_gn_2_92701 5.0kb upstream 5.0kb upstream 11113   true Lsat_1_v8_lg_2: 168915514-168926626 Lactuca sativa
Lsat_1_v5_gn_2_92701 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 168915514-168920513 Lactuca sativa
Lsat_1_v5_gn_2_92701 5.0kb downstream 5.0kb downstream 11113   true Lsat_1_v8_lg_2: 168920514-168931626 Lactuca sativa
Lsat_1_v5_gn_2_92701 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 168926627-168931626 Lactuca sativa
Lsat_1_v5_gn_2_92701 10.0kb upstream 10.0kb upstream 16113   true Lsat_1_v8_lg_2: 168910514-168926626 Lactuca sativa
Lsat_1_v5_gn_2_92701 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 168910514-168920513 Lactuca sativa
Lsat_1_v5_gn_2_92701 10.0kb downstream 10.0kb downstream 16113   true Lsat_1_v8_lg_2: 168920514-168936626 Lactuca sativa
Lsat_1_v5_gn_2_92701 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 168926627-168936626 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479353 5263 Asterids View MSA
123751253 5271 Pentapetalae View MSA
122792090 5272 Eudicot View MSA
122044388 5273 Angiosperm View MSA
121350650 5274 Embryophyte View MSA
123381837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain