Gene : Lsat_1_v5_gn_2_80860 L. sativa V8
Defline:  (1 of 1) K12261 - 2-hydroxyacyl-CoA lyase 1 (HACL1) Genomic Order:  2191
Name:  ? Lsat_1_v5_gn_2_80860 Secondary Identifier:  ? PAC:38956728
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_80860 0.5kb upstream 0.5kb upstream 2742   true Lsat_1_v8_lg_2: 155378933-155381674 Lactuca sativa
Lsat_1_v5_gn_2_80860 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 155381175-155381674 Lactuca sativa
Lsat_1_v5_gn_2_80860 0.5kb downstream 0.5kb downstream 2742   true Lsat_1_v8_lg_2: 155378433-155381174 Lactuca sativa
Lsat_1_v5_gn_2_80860 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 155378433-155378932 Lactuca sativa
Lsat_1_v5_gn_2_80860 1.0kb upstream 1.0kb upstream 3242   true Lsat_1_v8_lg_2: 155378933-155382174 Lactuca sativa
Lsat_1_v5_gn_2_80860 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 155381175-155382174 Lactuca sativa
Lsat_1_v5_gn_2_80860 1.0kb downstream 1.0kb downstream 3242   true Lsat_1_v8_lg_2: 155377933-155381174 Lactuca sativa
Lsat_1_v5_gn_2_80860 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 155377933-155378932 Lactuca sativa
Lsat_1_v5_gn_2_80860 2.0kb upstream 2.0kb upstream 4242   true Lsat_1_v8_lg_2: 155378933-155383174 Lactuca sativa
Lsat_1_v5_gn_2_80860 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 155381175-155383174 Lactuca sativa
Lsat_1_v5_gn_2_80860 2.0kb downstream 2.0kb downstream 4242   true Lsat_1_v8_lg_2: 155376933-155381174 Lactuca sativa
Lsat_1_v5_gn_2_80860 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 155376933-155378932 Lactuca sativa
Lsat_1_v5_gn_2_80860 5.0kb upstream 5.0kb upstream 7242   true Lsat_1_v8_lg_2: 155378933-155386174 Lactuca sativa
Lsat_1_v5_gn_2_80860 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 155381175-155386174 Lactuca sativa
Lsat_1_v5_gn_2_80860 5.0kb downstream 5.0kb downstream 7242   true Lsat_1_v8_lg_2: 155373933-155381174 Lactuca sativa
Lsat_1_v5_gn_2_80860 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 155373933-155378932 Lactuca sativa
Lsat_1_v5_gn_2_80860 10.0kb upstream 10.0kb upstream 12242   true Lsat_1_v8_lg_2: 155378933-155391174 Lactuca sativa
Lsat_1_v5_gn_2_80860 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 155381175-155391174 Lactuca sativa
Lsat_1_v5_gn_2_80860 10.0kb downstream 10.0kb downstream 12242   true Lsat_1_v8_lg_2: 155368933-155381174 Lactuca sativa
Lsat_1_v5_gn_2_80860 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 155368933-155378932 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474699 5263 Asterids View MSA
123740686 5271 Pentapetalae View MSA
122785766 5272 Eudicot View MSA
122041866 5273 Angiosperm View MSA
121347920 5274 Embryophyte View MSA
123423961 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain