Gene : Lsat_1_v5_gn_2_82040 L. sativa V8
Defline:  (1 of 1) PTHR15140:SF6 - PROTEIN COEL-1, ISOFORM A Genomic Order:  2237
Name:  ? Lsat_1_v5_gn_2_82040 Secondary Identifier:  ? PAC:38960885
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_82040 0.5kb upstream 0.5kb upstream 5784   true Lsat_1_v8_lg_2: 156530409-156536192 Lactuca sativa
Lsat_1_v5_gn_2_82040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 156535693-156536192 Lactuca sativa
Lsat_1_v5_gn_2_82040 0.5kb downstream 0.5kb downstream 5784   true Lsat_1_v8_lg_2: 156529909-156535692 Lactuca sativa
Lsat_1_v5_gn_2_82040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 156529909-156530408 Lactuca sativa
Lsat_1_v5_gn_2_82040 1.0kb upstream 1.0kb upstream 6284   true Lsat_1_v8_lg_2: 156530409-156536692 Lactuca sativa
Lsat_1_v5_gn_2_82040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 156535693-156536692 Lactuca sativa
Lsat_1_v5_gn_2_82040 1.0kb downstream 1.0kb downstream 6284   true Lsat_1_v8_lg_2: 156529409-156535692 Lactuca sativa
Lsat_1_v5_gn_2_82040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 156529409-156530408 Lactuca sativa
Lsat_1_v5_gn_2_82040 2.0kb upstream 2.0kb upstream 7284   true Lsat_1_v8_lg_2: 156530409-156537692 Lactuca sativa
Lsat_1_v5_gn_2_82040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 156535693-156537692 Lactuca sativa
Lsat_1_v5_gn_2_82040 2.0kb downstream 2.0kb downstream 7284   true Lsat_1_v8_lg_2: 156528409-156535692 Lactuca sativa
Lsat_1_v5_gn_2_82040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 156528409-156530408 Lactuca sativa
Lsat_1_v5_gn_2_82040 5.0kb upstream 5.0kb upstream 10284   true Lsat_1_v8_lg_2: 156530409-156540692 Lactuca sativa
Lsat_1_v5_gn_2_82040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 156535693-156540692 Lactuca sativa
Lsat_1_v5_gn_2_82040 5.0kb downstream 5.0kb downstream 10284   true Lsat_1_v8_lg_2: 156525409-156535692 Lactuca sativa
Lsat_1_v5_gn_2_82040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 156525409-156530408 Lactuca sativa
Lsat_1_v5_gn_2_82040 10.0kb upstream 10.0kb upstream 15284   true Lsat_1_v8_lg_2: 156530409-156545692 Lactuca sativa
Lsat_1_v5_gn_2_82040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 156535693-156545692 Lactuca sativa
Lsat_1_v5_gn_2_82040 10.0kb downstream 10.0kb downstream 15284   true Lsat_1_v8_lg_2: 156520409-156535692 Lactuca sativa
Lsat_1_v5_gn_2_82040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 156520409-156530408 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474380 5263 Asterids View MSA
123740521 5271 Pentapetalae View MSA
122789325 5272 Eudicot View MSA
122048021 5273 Angiosperm View MSA
121345532 5274 Embryophyte View MSA
123427074 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain