Gene : Lsat_1_v5_gn_3_13421 L. sativa V8
Defline:  (1 of 1) PTHR22814//PTHR22814:SF136 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  451
Name:  ? Lsat_1_v5_gn_3_13421 Secondary Identifier:  ? PAC:38920170
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_13421 0.5kb upstream 0.5kb upstream 2124   true Lsat_1_v8_lg_3: 20300667-20302790 Lactuca sativa
Lsat_1_v5_gn_3_13421 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 20300667-20301166 Lactuca sativa
Lsat_1_v5_gn_3_13421 0.5kb downstream 0.5kb downstream 2124   true Lsat_1_v8_lg_3: 20301167-20303290 Lactuca sativa
Lsat_1_v5_gn_3_13421 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 20302791-20303290 Lactuca sativa
Lsat_1_v5_gn_3_13421 1.0kb upstream 1.0kb upstream 2624   true Lsat_1_v8_lg_3: 20300167-20302790 Lactuca sativa
Lsat_1_v5_gn_3_13421 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 20300167-20301166 Lactuca sativa
Lsat_1_v5_gn_3_13421 1.0kb downstream 1.0kb downstream 2624   true Lsat_1_v8_lg_3: 20301167-20303790 Lactuca sativa
Lsat_1_v5_gn_3_13421 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 20302791-20303790 Lactuca sativa
Lsat_1_v5_gn_3_13421 2.0kb upstream 2.0kb upstream 3624   true Lsat_1_v8_lg_3: 20299167-20302790 Lactuca sativa
Lsat_1_v5_gn_3_13421 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 20299167-20301166 Lactuca sativa
Lsat_1_v5_gn_3_13421 2.0kb downstream 2.0kb downstream 3624   true Lsat_1_v8_lg_3: 20301167-20304790 Lactuca sativa
Lsat_1_v5_gn_3_13421 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 20302791-20304790 Lactuca sativa
Lsat_1_v5_gn_3_13421 5.0kb upstream 5.0kb upstream 6624   true Lsat_1_v8_lg_3: 20296167-20302790 Lactuca sativa
Lsat_1_v5_gn_3_13421 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 20296167-20301166 Lactuca sativa
Lsat_1_v5_gn_3_13421 5.0kb downstream 5.0kb downstream 6624   true Lsat_1_v8_lg_3: 20301167-20307790 Lactuca sativa
Lsat_1_v5_gn_3_13421 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 20302791-20307790 Lactuca sativa
Lsat_1_v5_gn_3_13421 10.0kb upstream 10.0kb upstream 11624   true Lsat_1_v8_lg_3: 20291167-20302790 Lactuca sativa
Lsat_1_v5_gn_3_13421 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 20291167-20301166 Lactuca sativa
Lsat_1_v5_gn_3_13421 10.0kb downstream 10.0kb downstream 11624   true Lsat_1_v8_lg_3: 20301167-20312790 Lactuca sativa
Lsat_1_v5_gn_3_13421 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 20302791-20312790 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467020 5263 Asterids View MSA
123743604 5271 Pentapetalae View MSA
122788291 5272 Eudicot View MSA
122046308 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain