Gene : Lsat_1_v5_gn_3_137720 L. sativa V8
Defline:  (1 of 1) PF11721//PF12819 - Di-glucose binding within endoplasmic reticulum (Malectin) // Carbohydrate-binding protein of the ER (Malectin_like) Genomic Order:  3886
Name:  ? Lsat_1_v5_gn_3_137720 Secondary Identifier:  ? PAC:38920409
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_137720 0.5kb upstream 0.5kb upstream 3314   true Lsat_1_v8_lg_3: 250259183-250262496 Lactuca sativa
Lsat_1_v5_gn_3_137720 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 250259183-250259682 Lactuca sativa
Lsat_1_v5_gn_3_137720 0.5kb downstream 0.5kb downstream 3314   true Lsat_1_v8_lg_3: 250259683-250262996 Lactuca sativa
Lsat_1_v5_gn_3_137720 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 250262497-250262996 Lactuca sativa
Lsat_1_v5_gn_3_137720 1.0kb upstream 1.0kb upstream 3814   true Lsat_1_v8_lg_3: 250258683-250262496 Lactuca sativa
Lsat_1_v5_gn_3_137720 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 250258683-250259682 Lactuca sativa
Lsat_1_v5_gn_3_137720 1.0kb downstream 1.0kb downstream 3814   true Lsat_1_v8_lg_3: 250259683-250263496 Lactuca sativa
Lsat_1_v5_gn_3_137720 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 250262497-250263496 Lactuca sativa
Lsat_1_v5_gn_3_137720 2.0kb upstream 2.0kb upstream 4814   true Lsat_1_v8_lg_3: 250257683-250262496 Lactuca sativa
Lsat_1_v5_gn_3_137720 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 250257683-250259682 Lactuca sativa
Lsat_1_v5_gn_3_137720 2.0kb downstream 2.0kb downstream 4814   true Lsat_1_v8_lg_3: 250259683-250264496 Lactuca sativa
Lsat_1_v5_gn_3_137720 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 250262497-250264496 Lactuca sativa
Lsat_1_v5_gn_3_137720 5.0kb upstream 5.0kb upstream 7814   true Lsat_1_v8_lg_3: 250254683-250262496 Lactuca sativa
Lsat_1_v5_gn_3_137720 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 250254683-250259682 Lactuca sativa
Lsat_1_v5_gn_3_137720 5.0kb downstream 5.0kb downstream 7814   true Lsat_1_v8_lg_3: 250259683-250267496 Lactuca sativa
Lsat_1_v5_gn_3_137720 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 250262497-250267496 Lactuca sativa
Lsat_1_v5_gn_3_137720 10.0kb upstream 10.0kb upstream 12814   true Lsat_1_v8_lg_3: 250249683-250262496 Lactuca sativa
Lsat_1_v5_gn_3_137720 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 250249683-250259682 Lactuca sativa
Lsat_1_v5_gn_3_137720 10.0kb downstream 10.0kb downstream 12814   true Lsat_1_v8_lg_3: 250259683-250272496 Lactuca sativa
Lsat_1_v5_gn_3_137720 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 250262497-250272496 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029251 5273 Angiosperm View MSA
121469081 5263 Asterids View MSA
123753524 5271 Pentapetalae View MSA
122786120 5272 Eudicot View MSA
121346841 5274 Embryophyte View MSA
123380454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain