Gene : Lsat_1_v5_gn_3_139661 L. sativa V8
Defline:  (1 of 2) PTHR20994:SF0 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 6 Genomic Order:  3931
Name:  ? Lsat_1_v5_gn_3_139661 Secondary Identifier:  ? PAC:38916378
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_139661 0.5kb upstream 0.5kb upstream 4283   true Lsat_1_v8_lg_3: 253411807-253416089 Lactuca sativa
Lsat_1_v5_gn_3_139661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 253415590-253416089 Lactuca sativa
Lsat_1_v5_gn_3_139661 0.5kb downstream 0.5kb downstream 4283   true Lsat_1_v8_lg_3: 253411307-253415589 Lactuca sativa
Lsat_1_v5_gn_3_139661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 253411307-253411806 Lactuca sativa
Lsat_1_v5_gn_3_139661 1.0kb upstream 1.0kb upstream 4783   true Lsat_1_v8_lg_3: 253411807-253416589 Lactuca sativa
Lsat_1_v5_gn_3_139661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 253415590-253416589 Lactuca sativa
Lsat_1_v5_gn_3_139661 1.0kb downstream 1.0kb downstream 4783   true Lsat_1_v8_lg_3: 253410807-253415589 Lactuca sativa
Lsat_1_v5_gn_3_139661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 253410807-253411806 Lactuca sativa
Lsat_1_v5_gn_3_139661 2.0kb upstream 2.0kb upstream 5783   true Lsat_1_v8_lg_3: 253411807-253417589 Lactuca sativa
Lsat_1_v5_gn_3_139661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 253415590-253417589 Lactuca sativa
Lsat_1_v5_gn_3_139661 2.0kb downstream 2.0kb downstream 5783   true Lsat_1_v8_lg_3: 253409807-253415589 Lactuca sativa
Lsat_1_v5_gn_3_139661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 253409807-253411806 Lactuca sativa
Lsat_1_v5_gn_3_139661 5.0kb upstream 5.0kb upstream 8783   true Lsat_1_v8_lg_3: 253411807-253420589 Lactuca sativa
Lsat_1_v5_gn_3_139661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 253415590-253420589 Lactuca sativa
Lsat_1_v5_gn_3_139661 5.0kb downstream 5.0kb downstream 8783   true Lsat_1_v8_lg_3: 253406807-253415589 Lactuca sativa
Lsat_1_v5_gn_3_139661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 253406807-253411806 Lactuca sativa
Lsat_1_v5_gn_3_139661 10.0kb upstream 10.0kb upstream 13783   true Lsat_1_v8_lg_3: 253411807-253425589 Lactuca sativa
Lsat_1_v5_gn_3_139661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 253415590-253425589 Lactuca sativa
Lsat_1_v5_gn_3_139661 10.0kb downstream 10.0kb downstream 13783   true Lsat_1_v8_lg_3: 253401807-253415589 Lactuca sativa
Lsat_1_v5_gn_3_139661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 253401807-253411806 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041108 5273 Angiosperm View MSA
121474015 5263 Asterids View MSA
123746962 5271 Pentapetalae View MSA
122786107 5272 Eudicot View MSA
121346930 5274 Embryophyte View MSA
123425261 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain