Gene : Lsat_1_v5_gn_0_37081 L. sativa V8
Defline:  (1 of 3) K03768 - peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] (PPIB, ppiB) Genomic Order:  982
Name:  ? Lsat_1_v5_gn_0_37081 Secondary Identifier:  ? PAC:38915538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_37081 0.5kb upstream 0.5kb upstream 2386   true Lsat_1_v8_lg_3: 41326780-41329165 Lactuca sativa
Lsat_1_v5_gn_0_37081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 41328666-41329165 Lactuca sativa
Lsat_1_v5_gn_0_37081 0.5kb downstream 0.5kb downstream 2386   true Lsat_1_v8_lg_3: 41326280-41328665 Lactuca sativa
Lsat_1_v5_gn_0_37081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 41326280-41326779 Lactuca sativa
Lsat_1_v5_gn_0_37081 1.0kb upstream 1.0kb upstream 2886   true Lsat_1_v8_lg_3: 41326780-41329665 Lactuca sativa
Lsat_1_v5_gn_0_37081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 41328666-41329665 Lactuca sativa
Lsat_1_v5_gn_0_37081 1.0kb downstream 1.0kb downstream 2886   true Lsat_1_v8_lg_3: 41325780-41328665 Lactuca sativa
Lsat_1_v5_gn_0_37081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 41325780-41326779 Lactuca sativa
Lsat_1_v5_gn_0_37081 2.0kb upstream 2.0kb upstream 3886   true Lsat_1_v8_lg_3: 41326780-41330665 Lactuca sativa
Lsat_1_v5_gn_0_37081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 41328666-41330665 Lactuca sativa
Lsat_1_v5_gn_0_37081 2.0kb downstream 2.0kb downstream 3886   true Lsat_1_v8_lg_3: 41324780-41328665 Lactuca sativa
Lsat_1_v5_gn_0_37081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 41324780-41326779 Lactuca sativa
Lsat_1_v5_gn_0_37081 5.0kb upstream 5.0kb upstream 6886   true Lsat_1_v8_lg_3: 41326780-41333665 Lactuca sativa
Lsat_1_v5_gn_0_37081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 41328666-41333665 Lactuca sativa
Lsat_1_v5_gn_0_37081 5.0kb downstream 5.0kb downstream 6886   true Lsat_1_v8_lg_3: 41321780-41328665 Lactuca sativa
Lsat_1_v5_gn_0_37081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 41321780-41326779 Lactuca sativa
Lsat_1_v5_gn_0_37081 10.0kb upstream 10.0kb upstream 11886   true Lsat_1_v8_lg_3: 41326780-41338665 Lactuca sativa
Lsat_1_v5_gn_0_37081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 41328666-41338665 Lactuca sativa
Lsat_1_v5_gn_0_37081 10.0kb downstream 10.0kb downstream 11886   true Lsat_1_v8_lg_3: 41316780-41328665 Lactuca sativa
Lsat_1_v5_gn_0_37081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 41316780-41326779 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474518 5263 Asterids View MSA
123741646 5271 Pentapetalae View MSA
122794502 5272 Eudicot View MSA
122048638 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349242 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain