Gene : Lsat_1_v5_gn_3_105561 L. sativa V8
Defline:  (1 of 1) K11352 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12 (NDUFA12) Genomic Order:  3056
Name:  ? Lsat_1_v5_gn_3_105561 Secondary Identifier:  ? PAC:38916200
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3781 Lactuca sativa pathologic  
Lsativa PWY-4302 Lactuca sativa pathologic  
Lsativa PWY-5083 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_105561 0.5kb upstream 0.5kb upstream 2532   true Lsat_1_v8_lg_3: 172383466-172385997 Lactuca sativa
Lsat_1_v5_gn_3_105561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 172385498-172385997 Lactuca sativa
Lsat_1_v5_gn_3_105561 0.5kb downstream 0.5kb downstream 2532   true Lsat_1_v8_lg_3: 172382966-172385497 Lactuca sativa
Lsat_1_v5_gn_3_105561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 172382966-172383465 Lactuca sativa
Lsat_1_v5_gn_3_105561 1.0kb upstream 1.0kb upstream 3032   true Lsat_1_v8_lg_3: 172383466-172386497 Lactuca sativa
Lsat_1_v5_gn_3_105561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 172385498-172386497 Lactuca sativa
Lsat_1_v5_gn_3_105561 1.0kb downstream 1.0kb downstream 3032   true Lsat_1_v8_lg_3: 172382466-172385497 Lactuca sativa
Lsat_1_v5_gn_3_105561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 172382466-172383465 Lactuca sativa
Lsat_1_v5_gn_3_105561 2.0kb upstream 2.0kb upstream 4032   true Lsat_1_v8_lg_3: 172383466-172387497 Lactuca sativa
Lsat_1_v5_gn_3_105561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 172385498-172387497 Lactuca sativa
Lsat_1_v5_gn_3_105561 2.0kb downstream 2.0kb downstream 4032   true Lsat_1_v8_lg_3: 172381466-172385497 Lactuca sativa
Lsat_1_v5_gn_3_105561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 172381466-172383465 Lactuca sativa
Lsat_1_v5_gn_3_105561 5.0kb upstream 5.0kb upstream 7032   true Lsat_1_v8_lg_3: 172383466-172390497 Lactuca sativa
Lsat_1_v5_gn_3_105561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 172385498-172390497 Lactuca sativa
Lsat_1_v5_gn_3_105561 5.0kb downstream 5.0kb downstream 7032   true Lsat_1_v8_lg_3: 172378466-172385497 Lactuca sativa
Lsat_1_v5_gn_3_105561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 172378466-172383465 Lactuca sativa
Lsat_1_v5_gn_3_105561 10.0kb upstream 10.0kb upstream 12032   true Lsat_1_v8_lg_3: 172383466-172395497 Lactuca sativa
Lsat_1_v5_gn_3_105561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 172385498-172395497 Lactuca sativa
Lsat_1_v5_gn_3_105561 10.0kb downstream 10.0kb downstream 12032   true Lsat_1_v8_lg_3: 172373466-172385497 Lactuca sativa
Lsat_1_v5_gn_3_105561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 172373466-172383465 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467825 5263 Asterids View MSA
123737211 5271 Pentapetalae View MSA
122787293 5272 Eudicot View MSA
122043638 5273 Angiosperm View MSA
121345011 5274 Embryophyte View MSA
123426349 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain