Gene : Lsat_1_v5_gn_3_111580 L. sativa V8
Defline:  (1 of 2) PTHR10891//PTHR10891:SF586 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 6-RELATED Genomic Order:  3245
Name:  ? Lsat_1_v5_gn_3_111580 Secondary Identifier:  ? PAC:38917608
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_111580 0.5kb upstream 0.5kb upstream 1463   true Lsat_1_v8_lg_3: 187468990-187470452 Lactuca sativa
Lsat_1_v5_gn_3_111580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 187469953-187470452 Lactuca sativa
Lsat_1_v5_gn_3_111580 0.5kb downstream 0.5kb downstream 1463   true Lsat_1_v8_lg_3: 187468490-187469952 Lactuca sativa
Lsat_1_v5_gn_3_111580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 187468490-187468989 Lactuca sativa
Lsat_1_v5_gn_3_111580 1.0kb upstream 1.0kb upstream 1963   true Lsat_1_v8_lg_3: 187468990-187470952 Lactuca sativa
Lsat_1_v5_gn_3_111580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 187469953-187470952 Lactuca sativa
Lsat_1_v5_gn_3_111580 1.0kb downstream 1.0kb downstream 1963   true Lsat_1_v8_lg_3: 187467990-187469952 Lactuca sativa
Lsat_1_v5_gn_3_111580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 187467990-187468989 Lactuca sativa
Lsat_1_v5_gn_3_111580 2.0kb upstream 2.0kb upstream 2963   true Lsat_1_v8_lg_3: 187468990-187471952 Lactuca sativa
Lsat_1_v5_gn_3_111580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 187469953-187471952 Lactuca sativa
Lsat_1_v5_gn_3_111580 2.0kb downstream 2.0kb downstream 2963   true Lsat_1_v8_lg_3: 187466990-187469952 Lactuca sativa
Lsat_1_v5_gn_3_111580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 187466990-187468989 Lactuca sativa
Lsat_1_v5_gn_3_111580 5.0kb upstream 5.0kb upstream 5963   true Lsat_1_v8_lg_3: 187468990-187474952 Lactuca sativa
Lsat_1_v5_gn_3_111580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 187469953-187474952 Lactuca sativa
Lsat_1_v5_gn_3_111580 5.0kb downstream 5.0kb downstream 5963   true Lsat_1_v8_lg_3: 187463990-187469952 Lactuca sativa
Lsat_1_v5_gn_3_111580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 187463990-187468989 Lactuca sativa
Lsat_1_v5_gn_3_111580 10.0kb upstream 10.0kb upstream 10963   true Lsat_1_v8_lg_3: 187468990-187479952 Lactuca sativa
Lsat_1_v5_gn_3_111580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 187469953-187479952 Lactuca sativa
Lsat_1_v5_gn_3_111580 10.0kb downstream 10.0kb downstream 10963   true Lsat_1_v8_lg_3: 187458990-187469952 Lactuca sativa
Lsat_1_v5_gn_3_111580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 187458990-187468989 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028011 5273 Angiosperm View MSA
121477900 5263 Asterids View MSA
123752599 5271 Pentapetalae View MSA
122791242 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain