Gene : Lsat_1_v5_gn_3_36200 L. sativa V8
Defline:  (1 of 3) K17839 - polyamine oxidase (PAO4, PAO3, PAO2) Genomic Order:  1175
Name:  ? Lsat_1_v5_gn_3_36200 Secondary Identifier:  ? PAC:38916038
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6441 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_36200 0.5kb upstream 0.5kb upstream 3426   true Lsat_1_v8_lg_3: 47274937-47278362 Lactuca sativa
Lsat_1_v5_gn_3_36200 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 47277863-47278362 Lactuca sativa
Lsat_1_v5_gn_3_36200 0.5kb downstream 0.5kb downstream 3426   true Lsat_1_v8_lg_3: 47274437-47277862 Lactuca sativa
Lsat_1_v5_gn_3_36200 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 47274437-47274936 Lactuca sativa
Lsat_1_v5_gn_3_36200 1.0kb upstream 1.0kb upstream 3926   true Lsat_1_v8_lg_3: 47274937-47278862 Lactuca sativa
Lsat_1_v5_gn_3_36200 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 47277863-47278862 Lactuca sativa
Lsat_1_v5_gn_3_36200 1.0kb downstream 1.0kb downstream 3926   true Lsat_1_v8_lg_3: 47273937-47277862 Lactuca sativa
Lsat_1_v5_gn_3_36200 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 47273937-47274936 Lactuca sativa
Lsat_1_v5_gn_3_36200 2.0kb upstream 2.0kb upstream 4926   true Lsat_1_v8_lg_3: 47274937-47279862 Lactuca sativa
Lsat_1_v5_gn_3_36200 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 47277863-47279862 Lactuca sativa
Lsat_1_v5_gn_3_36200 2.0kb downstream 2.0kb downstream 4926   true Lsat_1_v8_lg_3: 47272937-47277862 Lactuca sativa
Lsat_1_v5_gn_3_36200 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 47272937-47274936 Lactuca sativa
Lsat_1_v5_gn_3_36200 5.0kb upstream 5.0kb upstream 7926   true Lsat_1_v8_lg_3: 47274937-47282862 Lactuca sativa
Lsat_1_v5_gn_3_36200 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 47277863-47282862 Lactuca sativa
Lsat_1_v5_gn_3_36200 5.0kb downstream 5.0kb downstream 7926   true Lsat_1_v8_lg_3: 47269937-47277862 Lactuca sativa
Lsat_1_v5_gn_3_36200 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 47269937-47274936 Lactuca sativa
Lsat_1_v5_gn_3_36200 10.0kb upstream 10.0kb upstream 12926   true Lsat_1_v8_lg_3: 47274937-47287862 Lactuca sativa
Lsat_1_v5_gn_3_36200 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 47277863-47287862 Lactuca sativa
Lsat_1_v5_gn_3_36200 10.0kb downstream 10.0kb downstream 12926   true Lsat_1_v8_lg_3: 47264937-47277862 Lactuca sativa
Lsat_1_v5_gn_3_36200 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 47264937-47274936 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121453520 5263 Asterids View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain