Gene : Lsat_1_v5_gn_3_41840 L. sativa V8
Defline:  (1 of 1) K15341 - DNA cross-link repair 1B protein [EC:3.1.-.-] (DCLRE1B, SNM1B) Genomic Order:  1356
Name:  ? Lsat_1_v5_gn_3_41840 Secondary Identifier:  ? PAC:38916276
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_41840 0.5kb upstream 0.5kb upstream 2690   true Lsat_1_v8_lg_3: 54142507-54145196 Lactuca sativa
Lsat_1_v5_gn_3_41840 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 54144697-54145196 Lactuca sativa
Lsat_1_v5_gn_3_41840 0.5kb downstream 0.5kb downstream 2690   true Lsat_1_v8_lg_3: 54142007-54144696 Lactuca sativa
Lsat_1_v5_gn_3_41840 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 54142007-54142506 Lactuca sativa
Lsat_1_v5_gn_3_41840 1.0kb upstream 1.0kb upstream 3190   true Lsat_1_v8_lg_3: 54142507-54145696 Lactuca sativa
Lsat_1_v5_gn_3_41840 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 54144697-54145696 Lactuca sativa
Lsat_1_v5_gn_3_41840 1.0kb downstream 1.0kb downstream 3190   true Lsat_1_v8_lg_3: 54141507-54144696 Lactuca sativa
Lsat_1_v5_gn_3_41840 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 54141507-54142506 Lactuca sativa
Lsat_1_v5_gn_3_41840 2.0kb upstream 2.0kb upstream 4190   true Lsat_1_v8_lg_3: 54142507-54146696 Lactuca sativa
Lsat_1_v5_gn_3_41840 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 54144697-54146696 Lactuca sativa
Lsat_1_v5_gn_3_41840 2.0kb downstream 2.0kb downstream 4190   true Lsat_1_v8_lg_3: 54140507-54144696 Lactuca sativa
Lsat_1_v5_gn_3_41840 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 54140507-54142506 Lactuca sativa
Lsat_1_v5_gn_3_41840 5.0kb upstream 5.0kb upstream 7190   true Lsat_1_v8_lg_3: 54142507-54149696 Lactuca sativa
Lsat_1_v5_gn_3_41840 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 54144697-54149696 Lactuca sativa
Lsat_1_v5_gn_3_41840 5.0kb downstream 5.0kb downstream 7190   true Lsat_1_v8_lg_3: 54137507-54144696 Lactuca sativa
Lsat_1_v5_gn_3_41840 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 54137507-54142506 Lactuca sativa
Lsat_1_v5_gn_3_41840 10.0kb upstream 10.0kb upstream 12190   true Lsat_1_v8_lg_3: 54142507-54154696 Lactuca sativa
Lsat_1_v5_gn_3_41840 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 54144697-54154696 Lactuca sativa
Lsat_1_v5_gn_3_41840 10.0kb downstream 10.0kb downstream 12190   true Lsat_1_v8_lg_3: 54132507-54144696 Lactuca sativa
Lsat_1_v5_gn_3_41840 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 54132507-54142506 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470904 5263 Asterids View MSA
123741645 5271 Pentapetalae View MSA
122793173 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain