Gene : Lsat_1_v5_gn_3_16380 L. sativa V8
Defline:  (1 of 2) PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Genomic Order:  498
Name:  ? Lsat_1_v5_gn_3_16380 Secondary Identifier:  ? PAC:38915449
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_16380 0.5kb upstream 0.5kb upstream 3316   true Lsat_1_v8_lg_3: 22105710-22109025 Lactuca sativa
Lsat_1_v5_gn_3_16380 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 22105710-22106209 Lactuca sativa
Lsat_1_v5_gn_3_16380 0.5kb downstream 0.5kb downstream 3316   true Lsat_1_v8_lg_3: 22106210-22109525 Lactuca sativa
Lsat_1_v5_gn_3_16380 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 22109026-22109525 Lactuca sativa
Lsat_1_v5_gn_3_16380 1.0kb upstream 1.0kb upstream 3816   true Lsat_1_v8_lg_3: 22105210-22109025 Lactuca sativa
Lsat_1_v5_gn_3_16380 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 22105210-22106209 Lactuca sativa
Lsat_1_v5_gn_3_16380 1.0kb downstream 1.0kb downstream 3816   true Lsat_1_v8_lg_3: 22106210-22110025 Lactuca sativa
Lsat_1_v5_gn_3_16380 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 22109026-22110025 Lactuca sativa
Lsat_1_v5_gn_3_16380 2.0kb upstream 2.0kb upstream 4816   true Lsat_1_v8_lg_3: 22104210-22109025 Lactuca sativa
Lsat_1_v5_gn_3_16380 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 22104210-22106209 Lactuca sativa
Lsat_1_v5_gn_3_16380 2.0kb downstream 2.0kb downstream 4816   true Lsat_1_v8_lg_3: 22106210-22111025 Lactuca sativa
Lsat_1_v5_gn_3_16380 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 22109026-22111025 Lactuca sativa
Lsat_1_v5_gn_3_16380 5.0kb upstream 5.0kb upstream 7816   true Lsat_1_v8_lg_3: 22101210-22109025 Lactuca sativa
Lsat_1_v5_gn_3_16380 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 22101210-22106209 Lactuca sativa
Lsat_1_v5_gn_3_16380 5.0kb downstream 5.0kb downstream 7816   true Lsat_1_v8_lg_3: 22106210-22114025 Lactuca sativa
Lsat_1_v5_gn_3_16380 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 22109026-22114025 Lactuca sativa
Lsat_1_v5_gn_3_16380 10.0kb upstream 10.0kb upstream 12816   true Lsat_1_v8_lg_3: 22096210-22109025 Lactuca sativa
Lsat_1_v5_gn_3_16380 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 22096210-22106209 Lactuca sativa
Lsat_1_v5_gn_3_16380 10.0kb downstream 10.0kb downstream 12816   true Lsat_1_v8_lg_3: 22106210-22119025 Lactuca sativa
Lsat_1_v5_gn_3_16380 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 22109026-22119025 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481218 5263 Asterids View MSA
123751107 5271 Pentapetalae View MSA
122796943 5272 Eudicot View MSA
122050104 5273 Angiosperm View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain