Gene : Lsat_1_v5_gn_3_17880 L. sativa V8
Defline:  (1 of 3) PTHR24006//PTHR24006:SF451 - FAMILY NOT NAMED // UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Genomic Order:  537
Name:  ? Lsat_1_v5_gn_3_17880 Secondary Identifier:  ? PAC:38917125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_17880 0.5kb upstream 0.5kb upstream 4128   true Lsat_1_v8_lg_3: 24194553-24198680 Lactuca sativa
Lsat_1_v5_gn_3_17880 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 24194553-24195052 Lactuca sativa
Lsat_1_v5_gn_3_17880 0.5kb downstream 0.5kb downstream 4128   true Lsat_1_v8_lg_3: 24195053-24199180 Lactuca sativa
Lsat_1_v5_gn_3_17880 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 24198681-24199180 Lactuca sativa
Lsat_1_v5_gn_3_17880 1.0kb upstream 1.0kb upstream 4628   true Lsat_1_v8_lg_3: 24194053-24198680 Lactuca sativa
Lsat_1_v5_gn_3_17880 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 24194053-24195052 Lactuca sativa
Lsat_1_v5_gn_3_17880 1.0kb downstream 1.0kb downstream 4628   true Lsat_1_v8_lg_3: 24195053-24199680 Lactuca sativa
Lsat_1_v5_gn_3_17880 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 24198681-24199680 Lactuca sativa
Lsat_1_v5_gn_3_17880 2.0kb upstream 2.0kb upstream 5628   true Lsat_1_v8_lg_3: 24193053-24198680 Lactuca sativa
Lsat_1_v5_gn_3_17880 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 24193053-24195052 Lactuca sativa
Lsat_1_v5_gn_3_17880 2.0kb downstream 2.0kb downstream 5628   true Lsat_1_v8_lg_3: 24195053-24200680 Lactuca sativa
Lsat_1_v5_gn_3_17880 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 24198681-24200680 Lactuca sativa
Lsat_1_v5_gn_3_17880 5.0kb upstream 5.0kb upstream 8628   true Lsat_1_v8_lg_3: 24190053-24198680 Lactuca sativa
Lsat_1_v5_gn_3_17880 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 24190053-24195052 Lactuca sativa
Lsat_1_v5_gn_3_17880 5.0kb downstream 5.0kb downstream 8628   true Lsat_1_v8_lg_3: 24195053-24203680 Lactuca sativa
Lsat_1_v5_gn_3_17880 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 24198681-24203680 Lactuca sativa
Lsat_1_v5_gn_3_17880 10.0kb upstream 10.0kb upstream 13628   true Lsat_1_v8_lg_3: 24185053-24198680 Lactuca sativa
Lsat_1_v5_gn_3_17880 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 24185053-24195052 Lactuca sativa
Lsat_1_v5_gn_3_17880 10.0kb downstream 10.0kb downstream 13628   true Lsat_1_v8_lg_3: 24195053-24208680 Lactuca sativa
Lsat_1_v5_gn_3_17880 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 24198681-24208680 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481127 5263 Asterids View MSA
123747010 5271 Pentapetalae View MSA
122793778 5272 Eudicot View MSA
122046494 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain