Gene : Lsat_1_v5_gn_3_17720 L. sativa V8
Defline:  (1 of 1) PTHR34190//PTHR34190:SF3 - FAMILY NOT NAMED // MICROSPORE-SPECIFIC PROMOTER 2 Genomic Order:  530
Name:  ? Lsat_1_v5_gn_3_17720 Secondary Identifier:  ? PAC:38915066
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_17720 0.5kb upstream 0.5kb upstream 1372   true Lsat_1_v8_lg_3: 23775908-23777279 Lactuca sativa
Lsat_1_v5_gn_3_17720 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 23775908-23776407 Lactuca sativa
Lsat_1_v5_gn_3_17720 0.5kb downstream 0.5kb downstream 1372   true Lsat_1_v8_lg_3: 23776408-23777779 Lactuca sativa
Lsat_1_v5_gn_3_17720 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 23777280-23777779 Lactuca sativa
Lsat_1_v5_gn_3_17720 1.0kb upstream 1.0kb upstream 1872   true Lsat_1_v8_lg_3: 23775408-23777279 Lactuca sativa
Lsat_1_v5_gn_3_17720 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 23775408-23776407 Lactuca sativa
Lsat_1_v5_gn_3_17720 1.0kb downstream 1.0kb downstream 1872   true Lsat_1_v8_lg_3: 23776408-23778279 Lactuca sativa
Lsat_1_v5_gn_3_17720 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 23777280-23778279 Lactuca sativa
Lsat_1_v5_gn_3_17720 2.0kb upstream 2.0kb upstream 2872   true Lsat_1_v8_lg_3: 23774408-23777279 Lactuca sativa
Lsat_1_v5_gn_3_17720 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 23774408-23776407 Lactuca sativa
Lsat_1_v5_gn_3_17720 2.0kb downstream 2.0kb downstream 2872   true Lsat_1_v8_lg_3: 23776408-23779279 Lactuca sativa
Lsat_1_v5_gn_3_17720 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 23777280-23779279 Lactuca sativa
Lsat_1_v5_gn_3_17720 5.0kb upstream 5.0kb upstream 5872   true Lsat_1_v8_lg_3: 23771408-23777279 Lactuca sativa
Lsat_1_v5_gn_3_17720 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 23771408-23776407 Lactuca sativa
Lsat_1_v5_gn_3_17720 5.0kb downstream 5.0kb downstream 5872   true Lsat_1_v8_lg_3: 23776408-23782279 Lactuca sativa
Lsat_1_v5_gn_3_17720 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 23777280-23782279 Lactuca sativa
Lsat_1_v5_gn_3_17720 10.0kb upstream 10.0kb upstream 10872   true Lsat_1_v8_lg_3: 23766408-23777279 Lactuca sativa
Lsat_1_v5_gn_3_17720 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 23766408-23776407 Lactuca sativa
Lsat_1_v5_gn_3_17720 10.0kb downstream 10.0kb downstream 10872   true Lsat_1_v8_lg_3: 23776408-23787279 Lactuca sativa
Lsat_1_v5_gn_3_17720 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 23777280-23787279 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791974 5273 Angiosperm View MSA
121451273 5263 Asterids View MSA
123748958 5271 Pentapetalae View MSA
122795694 5272 Eudicot View MSA
121063238 5274 Embryophyte View MSA
123103002 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain