Gene : Lsat_1_v5_gn_3_19861 L. sativa V8
Defline:  (1 of 7) PF03350 - Uncharacterized protein family, UPF0114 (UPF0114) Genomic Order:  616
Name:  ? Lsat_1_v5_gn_3_19861 Secondary Identifier:  ? PAC:38915343
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_19861 0.5kb upstream 0.5kb upstream 2303   true Lsat_1_v8_lg_3: 27589925-27592227 Lactuca sativa
Lsat_1_v5_gn_3_19861 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 27589925-27590424 Lactuca sativa
Lsat_1_v5_gn_3_19861 0.5kb downstream 0.5kb downstream 2303   true Lsat_1_v8_lg_3: 27590425-27592727 Lactuca sativa
Lsat_1_v5_gn_3_19861 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 27592228-27592727 Lactuca sativa
Lsat_1_v5_gn_3_19861 1.0kb upstream 1.0kb upstream 2803   true Lsat_1_v8_lg_3: 27589425-27592227 Lactuca sativa
Lsat_1_v5_gn_3_19861 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 27589425-27590424 Lactuca sativa
Lsat_1_v5_gn_3_19861 1.0kb downstream 1.0kb downstream 2803   true Lsat_1_v8_lg_3: 27590425-27593227 Lactuca sativa
Lsat_1_v5_gn_3_19861 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 27592228-27593227 Lactuca sativa
Lsat_1_v5_gn_3_19861 2.0kb upstream 2.0kb upstream 3803   true Lsat_1_v8_lg_3: 27588425-27592227 Lactuca sativa
Lsat_1_v5_gn_3_19861 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 27588425-27590424 Lactuca sativa
Lsat_1_v5_gn_3_19861 2.0kb downstream 2.0kb downstream 3803   true Lsat_1_v8_lg_3: 27590425-27594227 Lactuca sativa
Lsat_1_v5_gn_3_19861 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 27592228-27594227 Lactuca sativa
Lsat_1_v5_gn_3_19861 5.0kb upstream 5.0kb upstream 6803   true Lsat_1_v8_lg_3: 27585425-27592227 Lactuca sativa
Lsat_1_v5_gn_3_19861 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 27585425-27590424 Lactuca sativa
Lsat_1_v5_gn_3_19861 5.0kb downstream 5.0kb downstream 6803   true Lsat_1_v8_lg_3: 27590425-27597227 Lactuca sativa
Lsat_1_v5_gn_3_19861 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 27592228-27597227 Lactuca sativa
Lsat_1_v5_gn_3_19861 10.0kb upstream 10.0kb upstream 11803   true Lsat_1_v8_lg_3: 27580425-27592227 Lactuca sativa
Lsat_1_v5_gn_3_19861 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 27580425-27590424 Lactuca sativa
Lsat_1_v5_gn_3_19861 10.0kb downstream 10.0kb downstream 11803   true Lsat_1_v8_lg_3: 27590425-27602227 Lactuca sativa
Lsat_1_v5_gn_3_19861 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 27592228-27602227 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470739 5263 Asterids View MSA
123738693 5271 Pentapetalae View MSA
122789368 5272 Eudicot View MSA
122048009 5273 Angiosperm View MSA
121348495 5274 Embryophyte View MSA
123426050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain