Gene : Lsat_1_v5_gn_3_30161 L. sativa V8
Defline:  (1 of 3) 1.2.1.3//6.2.1.5 - Aldehyde dehydrogenase (NAD(+)) // Succinate--CoA ligase (ADP-forming) / Succinyl-CoA synthetase (ADP-forming) Genomic Order:  916
Name:  ? Lsat_1_v5_gn_3_30161 Secondary Identifier:  ? PAC:38918720
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-2724 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa PWY-5690 Lactuca sativa pathologic  
Lsativa PWY-6054 Lactuca sativa pathologic  
Lsativa PWY66-21 Lactuca sativa pathologic  
Lsativa PWY66-389 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_30161 0.5kb upstream 0.5kb upstream 5061   true Lsat_1_v8_lg_3: 38898425-38903485 Lactuca sativa
Lsat_1_v5_gn_3_30161 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 38898425-38898924 Lactuca sativa
Lsat_1_v5_gn_3_30161 0.5kb downstream 0.5kb downstream 5061   true Lsat_1_v8_lg_3: 38898925-38903985 Lactuca sativa
Lsat_1_v5_gn_3_30161 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 38903486-38903985 Lactuca sativa
Lsat_1_v5_gn_3_30161 1.0kb upstream 1.0kb upstream 5561   true Lsat_1_v8_lg_3: 38897925-38903485 Lactuca sativa
Lsat_1_v5_gn_3_30161 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 38897925-38898924 Lactuca sativa
Lsat_1_v5_gn_3_30161 1.0kb downstream 1.0kb downstream 5561   true Lsat_1_v8_lg_3: 38898925-38904485 Lactuca sativa
Lsat_1_v5_gn_3_30161 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 38903486-38904485 Lactuca sativa
Lsat_1_v5_gn_3_30161 2.0kb upstream 2.0kb upstream 6561   true Lsat_1_v8_lg_3: 38896925-38903485 Lactuca sativa
Lsat_1_v5_gn_3_30161 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 38896925-38898924 Lactuca sativa
Lsat_1_v5_gn_3_30161 2.0kb downstream 2.0kb downstream 6561   true Lsat_1_v8_lg_3: 38898925-38905485 Lactuca sativa
Lsat_1_v5_gn_3_30161 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 38903486-38905485 Lactuca sativa
Lsat_1_v5_gn_3_30161 5.0kb upstream 5.0kb upstream 9561   true Lsat_1_v8_lg_3: 38893925-38903485 Lactuca sativa
Lsat_1_v5_gn_3_30161 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 38893925-38898924 Lactuca sativa
Lsat_1_v5_gn_3_30161 5.0kb downstream 5.0kb downstream 9561   true Lsat_1_v8_lg_3: 38898925-38908485 Lactuca sativa
Lsat_1_v5_gn_3_30161 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 38903486-38908485 Lactuca sativa
Lsat_1_v5_gn_3_30161 10.0kb upstream 10.0kb upstream 14561   true Lsat_1_v8_lg_3: 38888925-38903485 Lactuca sativa
Lsat_1_v5_gn_3_30161 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 38888925-38898924 Lactuca sativa
Lsat_1_v5_gn_3_30161 10.0kb downstream 10.0kb downstream 14561   true Lsat_1_v8_lg_3: 38898925-38913485 Lactuca sativa
Lsat_1_v5_gn_3_30161 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 38903486-38913485 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469276 5263 Asterids View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain