Gene : Lsat_1_v5_gn_3_8821 L. sativa V8
Defline:  (1 of 7) PTHR11661//PTHR11661:SF6 - 60S RIBOSOMAL PROTEIN L12 // SUBFAMILY NOT NAMED Genomic Order:  270
Name:  ? Lsat_1_v5_gn_3_8821 Secondary Identifier:  ? PAC:38915245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_8821 0.5kb upstream 0.5kb upstream 860   true Lsat_1_v8_lg_3: 11739427-11740286 Lactuca sativa
Lsat_1_v5_gn_3_8821 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 11739427-11739926 Lactuca sativa
Lsat_1_v5_gn_3_8821 0.5kb downstream 0.5kb downstream 860   true Lsat_1_v8_lg_3: 11739927-11740786 Lactuca sativa
Lsat_1_v5_gn_3_8821 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 11740287-11740786 Lactuca sativa
Lsat_1_v5_gn_3_8821 1.0kb upstream 1.0kb upstream 1360   true Lsat_1_v8_lg_3: 11738927-11740286 Lactuca sativa
Lsat_1_v5_gn_3_8821 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 11738927-11739926 Lactuca sativa
Lsat_1_v5_gn_3_8821 1.0kb downstream 1.0kb downstream 1360   true Lsat_1_v8_lg_3: 11739927-11741286 Lactuca sativa
Lsat_1_v5_gn_3_8821 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 11740287-11741286 Lactuca sativa
Lsat_1_v5_gn_3_8821 2.0kb upstream 2.0kb upstream 2360   true Lsat_1_v8_lg_3: 11737927-11740286 Lactuca sativa
Lsat_1_v5_gn_3_8821 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 11737927-11739926 Lactuca sativa
Lsat_1_v5_gn_3_8821 2.0kb downstream 2.0kb downstream 2360   true Lsat_1_v8_lg_3: 11739927-11742286 Lactuca sativa
Lsat_1_v5_gn_3_8821 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 11740287-11742286 Lactuca sativa
Lsat_1_v5_gn_3_8821 5.0kb upstream 5.0kb upstream 5360   true Lsat_1_v8_lg_3: 11734927-11740286 Lactuca sativa
Lsat_1_v5_gn_3_8821 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 11734927-11739926 Lactuca sativa
Lsat_1_v5_gn_3_8821 5.0kb downstream 5.0kb downstream 5360   true Lsat_1_v8_lg_3: 11739927-11745286 Lactuca sativa
Lsat_1_v5_gn_3_8821 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 11740287-11745286 Lactuca sativa
Lsat_1_v5_gn_3_8821 10.0kb upstream 10.0kb upstream 10360   true Lsat_1_v8_lg_3: 11729927-11740286 Lactuca sativa
Lsat_1_v5_gn_3_8821 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 11729927-11739926 Lactuca sativa
Lsat_1_v5_gn_3_8821 10.0kb downstream 10.0kb downstream 10360   true Lsat_1_v8_lg_3: 11739927-11750286 Lactuca sativa
Lsat_1_v5_gn_3_8821 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 11740287-11750286 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471257 5263 Asterids View MSA
123746729 5271 Pentapetalae View MSA
122788263 5272 Eudicot View MSA
122050201 5273 Angiosperm View MSA
121345263 5274 Embryophyte View MSA
123424135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain