Gene : Lsat_1_v5_gn_3_6140 L. sativa V8
Defline:  (1 of 3) K12392 - AP-1 complex subunit beta-1 (AP1B1) Genomic Order:  248
Name:  ? Lsat_1_v5_gn_3_6140 Secondary Identifier:  ? PAC:38917941
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_6140 0.5kb upstream 0.5kb upstream 4924   true Lsat_1_v8_lg_3: 10913451-10918374 Lactuca sativa
Lsat_1_v5_gn_3_6140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 10917875-10918374 Lactuca sativa
Lsat_1_v5_gn_3_6140 0.5kb downstream 0.5kb downstream 4924   true Lsat_1_v8_lg_3: 10912951-10917874 Lactuca sativa
Lsat_1_v5_gn_3_6140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 10912951-10913450 Lactuca sativa
Lsat_1_v5_gn_3_6140 1.0kb upstream 1.0kb upstream 5424   true Lsat_1_v8_lg_3: 10913451-10918874 Lactuca sativa
Lsat_1_v5_gn_3_6140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 10917875-10918874 Lactuca sativa
Lsat_1_v5_gn_3_6140 1.0kb downstream 1.0kb downstream 5424   true Lsat_1_v8_lg_3: 10912451-10917874 Lactuca sativa
Lsat_1_v5_gn_3_6140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 10912451-10913450 Lactuca sativa
Lsat_1_v5_gn_3_6140 2.0kb upstream 2.0kb upstream 6424   true Lsat_1_v8_lg_3: 10913451-10919874 Lactuca sativa
Lsat_1_v5_gn_3_6140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 10917875-10919874 Lactuca sativa
Lsat_1_v5_gn_3_6140 2.0kb downstream 2.0kb downstream 6424   true Lsat_1_v8_lg_3: 10911451-10917874 Lactuca sativa
Lsat_1_v5_gn_3_6140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 10911451-10913450 Lactuca sativa
Lsat_1_v5_gn_3_6140 5.0kb upstream 5.0kb upstream 9424   true Lsat_1_v8_lg_3: 10913451-10922874 Lactuca sativa
Lsat_1_v5_gn_3_6140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 10917875-10922874 Lactuca sativa
Lsat_1_v5_gn_3_6140 5.0kb downstream 5.0kb downstream 9424   true Lsat_1_v8_lg_3: 10908451-10917874 Lactuca sativa
Lsat_1_v5_gn_3_6140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 10908451-10913450 Lactuca sativa
Lsat_1_v5_gn_3_6140 10.0kb upstream 10.0kb upstream 14424   true Lsat_1_v8_lg_3: 10913451-10927874 Lactuca sativa
Lsat_1_v5_gn_3_6140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 10917875-10927874 Lactuca sativa
Lsat_1_v5_gn_3_6140 10.0kb downstream 10.0kb downstream 14424   true Lsat_1_v8_lg_3: 10903451-10917874 Lactuca sativa
Lsat_1_v5_gn_3_6140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 10903451-10913450 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121453988 5263 Asterids View MSA
123744505 5271 Pentapetalae View MSA
122790375 5272 Eudicot View MSA
122047828 5273 Angiosperm View MSA
121343872 5274 Embryophyte View MSA
123426129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain