Gene : Lsat_1_v5_gn_3_6221 L. sativa V8
Defline:  (1 of 2) PTHR13286//PTHR13286:SF8 - SAP30 // SUBFAMILY NOT NAMED Genomic Order:  245
Name:  ? Lsat_1_v5_gn_3_6221 Secondary Identifier:  ? PAC:38918299
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_6221 0.5kb upstream 0.5kb upstream 4240   true Lsat_1_v8_lg_3: 10886778-10891017 Lactuca sativa
Lsat_1_v5_gn_3_6221 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 10886778-10887277 Lactuca sativa
Lsat_1_v5_gn_3_6221 0.5kb downstream 0.5kb downstream 4240   true Lsat_1_v8_lg_3: 10887278-10891517 Lactuca sativa
Lsat_1_v5_gn_3_6221 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 10891018-10891517 Lactuca sativa
Lsat_1_v5_gn_3_6221 1.0kb upstream 1.0kb upstream 4740   true Lsat_1_v8_lg_3: 10886278-10891017 Lactuca sativa
Lsat_1_v5_gn_3_6221 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 10886278-10887277 Lactuca sativa
Lsat_1_v5_gn_3_6221 1.0kb downstream 1.0kb downstream 4740   true Lsat_1_v8_lg_3: 10887278-10892017 Lactuca sativa
Lsat_1_v5_gn_3_6221 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 10891018-10892017 Lactuca sativa
Lsat_1_v5_gn_3_6221 2.0kb upstream 2.0kb upstream 5740   true Lsat_1_v8_lg_3: 10885278-10891017 Lactuca sativa
Lsat_1_v5_gn_3_6221 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 10885278-10887277 Lactuca sativa
Lsat_1_v5_gn_3_6221 2.0kb downstream 2.0kb downstream 5740   true Lsat_1_v8_lg_3: 10887278-10893017 Lactuca sativa
Lsat_1_v5_gn_3_6221 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 10891018-10893017 Lactuca sativa
Lsat_1_v5_gn_3_6221 5.0kb upstream 5.0kb upstream 8740   true Lsat_1_v8_lg_3: 10882278-10891017 Lactuca sativa
Lsat_1_v5_gn_3_6221 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 10882278-10887277 Lactuca sativa
Lsat_1_v5_gn_3_6221 5.0kb downstream 5.0kb downstream 8740   true Lsat_1_v8_lg_3: 10887278-10896017 Lactuca sativa
Lsat_1_v5_gn_3_6221 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 10891018-10896017 Lactuca sativa
Lsat_1_v5_gn_3_6221 10.0kb upstream 10.0kb upstream 13740   true Lsat_1_v8_lg_3: 10877278-10891017 Lactuca sativa
Lsat_1_v5_gn_3_6221 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 10877278-10887277 Lactuca sativa
Lsat_1_v5_gn_3_6221 10.0kb downstream 10.0kb downstream 13740   true Lsat_1_v8_lg_3: 10887278-10901017 Lactuca sativa
Lsat_1_v5_gn_3_6221 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 10891018-10901017 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476987 5263 Asterids View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain