Gene : Lsat_1_v5_gn_4_124761 L. sativa V8
Defline:  (1 of 3) PF11347 - Protein of unknown function (DUF3148) (DUF3148) Genomic Order:  3546
Name:  ? Lsat_1_v5_gn_4_124761 Secondary Identifier:  ? PAC:38929341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_124761 0.5kb upstream 0.5kb upstream 1505   true Lsat_1_v8_lg_4: 226178832-226180336 Lactuca sativa
Lsat_1_v5_gn_4_124761 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 226179837-226180336 Lactuca sativa
Lsat_1_v5_gn_4_124761 0.5kb downstream 0.5kb downstream 1505   true Lsat_1_v8_lg_4: 226178332-226179836 Lactuca sativa
Lsat_1_v5_gn_4_124761 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 226178332-226178831 Lactuca sativa
Lsat_1_v5_gn_4_124761 1.0kb upstream 1.0kb upstream 2005   true Lsat_1_v8_lg_4: 226178832-226180836 Lactuca sativa
Lsat_1_v5_gn_4_124761 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 226179837-226180836 Lactuca sativa
Lsat_1_v5_gn_4_124761 1.0kb downstream 1.0kb downstream 2005   true Lsat_1_v8_lg_4: 226177832-226179836 Lactuca sativa
Lsat_1_v5_gn_4_124761 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 226177832-226178831 Lactuca sativa
Lsat_1_v5_gn_4_124761 2.0kb upstream 2.0kb upstream 3005   true Lsat_1_v8_lg_4: 226178832-226181836 Lactuca sativa
Lsat_1_v5_gn_4_124761 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 226179837-226181836 Lactuca sativa
Lsat_1_v5_gn_4_124761 2.0kb downstream 2.0kb downstream 3005   true Lsat_1_v8_lg_4: 226176832-226179836 Lactuca sativa
Lsat_1_v5_gn_4_124761 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 226176832-226178831 Lactuca sativa
Lsat_1_v5_gn_4_124761 5.0kb upstream 5.0kb upstream 6005   true Lsat_1_v8_lg_4: 226178832-226184836 Lactuca sativa
Lsat_1_v5_gn_4_124761 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 226179837-226184836 Lactuca sativa
Lsat_1_v5_gn_4_124761 5.0kb downstream 5.0kb downstream 6005   true Lsat_1_v8_lg_4: 226173832-226179836 Lactuca sativa
Lsat_1_v5_gn_4_124761 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 226173832-226178831 Lactuca sativa
Lsat_1_v5_gn_4_124761 10.0kb upstream 10.0kb upstream 11005   true Lsat_1_v8_lg_4: 226178832-226189836 Lactuca sativa
Lsat_1_v5_gn_4_124761 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 226179837-226189836 Lactuca sativa
Lsat_1_v5_gn_4_124761 10.0kb downstream 10.0kb downstream 11005   true Lsat_1_v8_lg_4: 226168832-226179836 Lactuca sativa
Lsat_1_v5_gn_4_124761 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 226168832-226178831 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476616 5263 Asterids View MSA
123741843 5271 Pentapetalae View MSA
122795737 5272 Eudicot View MSA
122044636 5273 Angiosperm View MSA
121348938 5274 Embryophyte View MSA
123381087 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain