Gene : Lsat_1_v5_gn_4_128060 L. sativa V8
Defline:  (1 of 1) PF00006//PF00306//PF00421 - ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) // ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C) // Photosystem II protein (PSII) Genomic Order:  3638
Name:  ? Lsat_1_v5_gn_4_128060 Secondary Identifier:  ? PAC:38929107
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_128060 0.5kb upstream 0.5kb upstream 1340   true Lsat_1_v8_lg_4: 238094084-238095423 Lactuca sativa
Lsat_1_v5_gn_4_128060 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 238094084-238094583 Lactuca sativa
Lsat_1_v5_gn_4_128060 0.5kb downstream 0.5kb downstream 1340   true Lsat_1_v8_lg_4: 238094584-238095923 Lactuca sativa
Lsat_1_v5_gn_4_128060 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 238095424-238095923 Lactuca sativa
Lsat_1_v5_gn_4_128060 1.0kb upstream 1.0kb upstream 1840   true Lsat_1_v8_lg_4: 238093584-238095423 Lactuca sativa
Lsat_1_v5_gn_4_128060 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 238093584-238094583 Lactuca sativa
Lsat_1_v5_gn_4_128060 1.0kb downstream 1.0kb downstream 1840   true Lsat_1_v8_lg_4: 238094584-238096423 Lactuca sativa
Lsat_1_v5_gn_4_128060 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 238095424-238096423 Lactuca sativa
Lsat_1_v5_gn_4_128060 2.0kb upstream 2.0kb upstream 2840   true Lsat_1_v8_lg_4: 238092584-238095423 Lactuca sativa
Lsat_1_v5_gn_4_128060 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 238092584-238094583 Lactuca sativa
Lsat_1_v5_gn_4_128060 2.0kb downstream 2.0kb downstream 2840   true Lsat_1_v8_lg_4: 238094584-238097423 Lactuca sativa
Lsat_1_v5_gn_4_128060 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 238095424-238097423 Lactuca sativa
Lsat_1_v5_gn_4_128060 5.0kb upstream 5.0kb upstream 5840   true Lsat_1_v8_lg_4: 238089584-238095423 Lactuca sativa
Lsat_1_v5_gn_4_128060 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 238089584-238094583 Lactuca sativa
Lsat_1_v5_gn_4_128060 5.0kb downstream 5.0kb downstream 5840   true Lsat_1_v8_lg_4: 238094584-238100423 Lactuca sativa
Lsat_1_v5_gn_4_128060 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 238095424-238100423 Lactuca sativa
Lsat_1_v5_gn_4_128060 10.0kb upstream 10.0kb upstream 10840   true Lsat_1_v8_lg_4: 238084584-238095423 Lactuca sativa
Lsat_1_v5_gn_4_128060 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 238084584-238094583 Lactuca sativa
Lsat_1_v5_gn_4_128060 10.0kb downstream 10.0kb downstream 10840   true Lsat_1_v8_lg_4: 238094584-238105423 Lactuca sativa
Lsat_1_v5_gn_4_128060 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 238095424-238105423 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121453957 5263 Asterids View MSA
123752529 5271 Pentapetalae View MSA
122774617 5272 Eudicot View MSA
122048462 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121310978 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain