Gene : Lsat_1_v5_gn_4_135761 L. sativa V8
Defline:  (1 of 1) PTHR22835//PTHR22835:SF207 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3798
Name:  ? Lsat_1_v5_gn_4_135761 Secondary Identifier:  ? PAC:38928848
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa LIPAS-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_135761 0.5kb upstream 0.5kb upstream 2331   true Lsat_1_v8_lg_4: 254067587-254069917 Lactuca sativa
Lsat_1_v5_gn_4_135761 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 254067587-254068086 Lactuca sativa
Lsat_1_v5_gn_4_135761 0.5kb downstream 0.5kb downstream 2331   true Lsat_1_v8_lg_4: 254068087-254070417 Lactuca sativa
Lsat_1_v5_gn_4_135761 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 254069918-254070417 Lactuca sativa
Lsat_1_v5_gn_4_135761 1.0kb upstream 1.0kb upstream 2831   true Lsat_1_v8_lg_4: 254067087-254069917 Lactuca sativa
Lsat_1_v5_gn_4_135761 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 254067087-254068086 Lactuca sativa
Lsat_1_v5_gn_4_135761 1.0kb downstream 1.0kb downstream 2831   true Lsat_1_v8_lg_4: 254068087-254070917 Lactuca sativa
Lsat_1_v5_gn_4_135761 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 254069918-254070917 Lactuca sativa
Lsat_1_v5_gn_4_135761 2.0kb upstream 2.0kb upstream 3831   true Lsat_1_v8_lg_4: 254066087-254069917 Lactuca sativa
Lsat_1_v5_gn_4_135761 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 254066087-254068086 Lactuca sativa
Lsat_1_v5_gn_4_135761 2.0kb downstream 2.0kb downstream 3831   true Lsat_1_v8_lg_4: 254068087-254071917 Lactuca sativa
Lsat_1_v5_gn_4_135761 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 254069918-254071917 Lactuca sativa
Lsat_1_v5_gn_4_135761 5.0kb upstream 5.0kb upstream 6831   true Lsat_1_v8_lg_4: 254063087-254069917 Lactuca sativa
Lsat_1_v5_gn_4_135761 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 254063087-254068086 Lactuca sativa
Lsat_1_v5_gn_4_135761 5.0kb downstream 5.0kb downstream 6831   true Lsat_1_v8_lg_4: 254068087-254074917 Lactuca sativa
Lsat_1_v5_gn_4_135761 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 254069918-254074917 Lactuca sativa
Lsat_1_v5_gn_4_135761 10.0kb upstream 10.0kb upstream 11831   true Lsat_1_v8_lg_4: 254058087-254069917 Lactuca sativa
Lsat_1_v5_gn_4_135761 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 254058087-254068086 Lactuca sativa
Lsat_1_v5_gn_4_135761 10.0kb downstream 10.0kb downstream 11831   true Lsat_1_v8_lg_4: 254068087-254079917 Lactuca sativa
Lsat_1_v5_gn_4_135761 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 254069918-254079917 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468725 5263 Asterids View MSA
123737678 5271 Pentapetalae View MSA
122786109 5272 Eudicot View MSA
122042489 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain