Gene : Lsat_1_v5_gn_4_140940 L. sativa V8
Defline:  (1 of 3) PTHR10857//PTHR10857:SF26 - COPINE // PROTEIN BONZAI 3 Genomic Order:  3970
Name:  ? Lsat_1_v5_gn_4_140940 Secondary Identifier:  ? PAC:38932995
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_140940 0.5kb upstream 0.5kb upstream 7386   true Lsat_1_v8_lg_4: 274257588-274264973 Lactuca sativa
Lsat_1_v5_gn_4_140940 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 274264474-274264973 Lactuca sativa
Lsat_1_v5_gn_4_140940 0.5kb downstream 0.5kb downstream 7386   true Lsat_1_v8_lg_4: 274257088-274264473 Lactuca sativa
Lsat_1_v5_gn_4_140940 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 274257088-274257587 Lactuca sativa
Lsat_1_v5_gn_4_140940 1.0kb upstream 1.0kb upstream 7886   true Lsat_1_v8_lg_4: 274257588-274265473 Lactuca sativa
Lsat_1_v5_gn_4_140940 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 274264474-274265473 Lactuca sativa
Lsat_1_v5_gn_4_140940 1.0kb downstream 1.0kb downstream 7886   true Lsat_1_v8_lg_4: 274256588-274264473 Lactuca sativa
Lsat_1_v5_gn_4_140940 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 274256588-274257587 Lactuca sativa
Lsat_1_v5_gn_4_140940 2.0kb upstream 2.0kb upstream 8886   true Lsat_1_v8_lg_4: 274257588-274266473 Lactuca sativa
Lsat_1_v5_gn_4_140940 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 274264474-274266473 Lactuca sativa
Lsat_1_v5_gn_4_140940 2.0kb downstream 2.0kb downstream 8886   true Lsat_1_v8_lg_4: 274255588-274264473 Lactuca sativa
Lsat_1_v5_gn_4_140940 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 274255588-274257587 Lactuca sativa
Lsat_1_v5_gn_4_140940 5.0kb upstream 5.0kb upstream 11886   true Lsat_1_v8_lg_4: 274257588-274269473 Lactuca sativa
Lsat_1_v5_gn_4_140940 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 274264474-274269473 Lactuca sativa
Lsat_1_v5_gn_4_140940 5.0kb downstream 5.0kb downstream 11886   true Lsat_1_v8_lg_4: 274252588-274264473 Lactuca sativa
Lsat_1_v5_gn_4_140940 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 274252588-274257587 Lactuca sativa
Lsat_1_v5_gn_4_140940 10.0kb upstream 10.0kb upstream 16886   true Lsat_1_v8_lg_4: 274257588-274274473 Lactuca sativa
Lsat_1_v5_gn_4_140940 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 274264474-274274473 Lactuca sativa
Lsat_1_v5_gn_4_140940 10.0kb downstream 10.0kb downstream 16886   true Lsat_1_v8_lg_4: 274247588-274264473 Lactuca sativa
Lsat_1_v5_gn_4_140940 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 274247588-274257587 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473705 5263 Asterids View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain