Gene : Lsat_1_v5_gn_4_140021 L. sativa V8
Defline:  (1 of 1) PF13414//PF14559 - TPR repeat (TPR_11) // Tetratricopeptide repeat (TPR_19) Genomic Order:  3962
Name:  ? Lsat_1_v5_gn_4_140021 Secondary Identifier:  ? PAC:38934850
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_140021 0.5kb upstream 0.5kb upstream 4334   true Lsat_1_v8_lg_4: 273658618-273662951 Lactuca sativa
Lsat_1_v5_gn_4_140021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 273658618-273659117 Lactuca sativa
Lsat_1_v5_gn_4_140021 0.5kb downstream 0.5kb downstream 4334   true Lsat_1_v8_lg_4: 273659118-273663451 Lactuca sativa
Lsat_1_v5_gn_4_140021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 273662952-273663451 Lactuca sativa
Lsat_1_v5_gn_4_140021 1.0kb upstream 1.0kb upstream 4834   true Lsat_1_v8_lg_4: 273658118-273662951 Lactuca sativa
Lsat_1_v5_gn_4_140021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 273658118-273659117 Lactuca sativa
Lsat_1_v5_gn_4_140021 1.0kb downstream 1.0kb downstream 4834   true Lsat_1_v8_lg_4: 273659118-273663951 Lactuca sativa
Lsat_1_v5_gn_4_140021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 273662952-273663951 Lactuca sativa
Lsat_1_v5_gn_4_140021 2.0kb upstream 2.0kb upstream 5834   true Lsat_1_v8_lg_4: 273657118-273662951 Lactuca sativa
Lsat_1_v5_gn_4_140021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 273657118-273659117 Lactuca sativa
Lsat_1_v5_gn_4_140021 2.0kb downstream 2.0kb downstream 5834   true Lsat_1_v8_lg_4: 273659118-273664951 Lactuca sativa
Lsat_1_v5_gn_4_140021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 273662952-273664951 Lactuca sativa
Lsat_1_v5_gn_4_140021 5.0kb upstream 5.0kb upstream 8834   true Lsat_1_v8_lg_4: 273654118-273662951 Lactuca sativa
Lsat_1_v5_gn_4_140021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 273654118-273659117 Lactuca sativa
Lsat_1_v5_gn_4_140021 5.0kb downstream 5.0kb downstream 8834   true Lsat_1_v8_lg_4: 273659118-273667951 Lactuca sativa
Lsat_1_v5_gn_4_140021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 273662952-273667951 Lactuca sativa
Lsat_1_v5_gn_4_140021 10.0kb upstream 10.0kb upstream 13834   true Lsat_1_v8_lg_4: 273649118-273662951 Lactuca sativa
Lsat_1_v5_gn_4_140021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 273649118-273659117 Lactuca sativa
Lsat_1_v5_gn_4_140021 10.0kb downstream 10.0kb downstream 13834   true Lsat_1_v8_lg_4: 273659118-273672951 Lactuca sativa
Lsat_1_v5_gn_4_140021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 273662952-273672951 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466775 5263 Asterids View MSA
123736679 5271 Pentapetalae View MSA
122790556 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain