Gene : Lsat_1_v5_gn_4_141480 L. sativa V8

Defline:  (1 of 3) K01834 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (PGAM, gpmA) Genomic Order:  4001
Name:  ? Lsat_1_v5_gn_4_141480 Secondary Identifier:  ? PAC:38929763

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ANAEROFRUCAT-PWY Lactuca sativa pathologic  
Lsativa ANAGLYCOLYSIS-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_141480 0.5kb upstream 0.5kb upstream 3829   true Lsat_1_v8_lg_4: 276121391-276125219 Lactuca sativa
Lsat_1_v5_gn_4_141480 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 276124720-276125219 Lactuca sativa
Lsat_1_v5_gn_4_141480 0.5kb downstream 0.5kb downstream 3829   true Lsat_1_v8_lg_4: 276120891-276124719 Lactuca sativa
Lsat_1_v5_gn_4_141480 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 276120891-276121390 Lactuca sativa
Lsat_1_v5_gn_4_141480 1.0kb upstream 1.0kb upstream 4329   true Lsat_1_v8_lg_4: 276121391-276125719 Lactuca sativa
Lsat_1_v5_gn_4_141480 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 276124720-276125719 Lactuca sativa
Lsat_1_v5_gn_4_141480 1.0kb downstream 1.0kb downstream 4329   true Lsat_1_v8_lg_4: 276120391-276124719 Lactuca sativa
Lsat_1_v5_gn_4_141480 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 276120391-276121390 Lactuca sativa
Lsat_1_v5_gn_4_141480 2.0kb upstream 2.0kb upstream 5329   true Lsat_1_v8_lg_4: 276121391-276126719 Lactuca sativa
Lsat_1_v5_gn_4_141480 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 276124720-276126719 Lactuca sativa
Lsat_1_v5_gn_4_141480 2.0kb downstream 2.0kb downstream 5329   true Lsat_1_v8_lg_4: 276119391-276124719 Lactuca sativa
Lsat_1_v5_gn_4_141480 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 276119391-276121390 Lactuca sativa
Lsat_1_v5_gn_4_141480 5.0kb upstream 5.0kb upstream 8329   true Lsat_1_v8_lg_4: 276121391-276129719 Lactuca sativa
Lsat_1_v5_gn_4_141480 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 276124720-276129719 Lactuca sativa
Lsat_1_v5_gn_4_141480 5.0kb downstream 5.0kb downstream 8329   true Lsat_1_v8_lg_4: 276116391-276124719 Lactuca sativa
Lsat_1_v5_gn_4_141480 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 276116391-276121390 Lactuca sativa
Lsat_1_v5_gn_4_141480 10.0kb upstream 10.0kb upstream 13329   true Lsat_1_v8_lg_4: 276121391-276134719 Lactuca sativa
Lsat_1_v5_gn_4_141480 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 276124720-276134719 Lactuca sativa
Lsat_1_v5_gn_4_141480 10.0kb downstream 10.0kb downstream 13329   true Lsat_1_v8_lg_4: 276111391-276124719 Lactuca sativa
Lsat_1_v5_gn_4_141480 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 276111391-276121390 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469501 5263 Asterids View MSA
123752797 5271 Pentapetalae View MSA
122793128 5272 Eudicot View MSA
122042134 5273 Angiosperm View MSA
121349250 5274 Embryophyte View MSA
123428363 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain