Gene : Lsat_1_v5_gn_3_98040 L. sativa V8
Defline:  (1 of 3) KOG3114 - Uncharacterized conserved protein Genomic Order:  2883
Name:  ? Lsat_1_v5_gn_3_98040 Secondary Identifier:  ? PAC:38920821
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_98040 0.5kb upstream 0.5kb upstream 3136   true Lsat_1_v8_lg_3: 154825525-154828660 Lactuca sativa
Lsat_1_v5_gn_3_98040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 154828161-154828660 Lactuca sativa
Lsat_1_v5_gn_3_98040 0.5kb downstream 0.5kb downstream 3136   true Lsat_1_v8_lg_3: 154825025-154828160 Lactuca sativa
Lsat_1_v5_gn_3_98040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 154825025-154825524 Lactuca sativa
Lsat_1_v5_gn_3_98040 1.0kb upstream 1.0kb upstream 3636   true Lsat_1_v8_lg_3: 154825525-154829160 Lactuca sativa
Lsat_1_v5_gn_3_98040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 154828161-154829160 Lactuca sativa
Lsat_1_v5_gn_3_98040 1.0kb downstream 1.0kb downstream 3636   true Lsat_1_v8_lg_3: 154824525-154828160 Lactuca sativa
Lsat_1_v5_gn_3_98040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 154824525-154825524 Lactuca sativa
Lsat_1_v5_gn_3_98040 2.0kb upstream 2.0kb upstream 4636   true Lsat_1_v8_lg_3: 154825525-154830160 Lactuca sativa
Lsat_1_v5_gn_3_98040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 154828161-154830160 Lactuca sativa
Lsat_1_v5_gn_3_98040 2.0kb downstream 2.0kb downstream 4636   true Lsat_1_v8_lg_3: 154823525-154828160 Lactuca sativa
Lsat_1_v5_gn_3_98040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 154823525-154825524 Lactuca sativa
Lsat_1_v5_gn_3_98040 5.0kb upstream 5.0kb upstream 7636   true Lsat_1_v8_lg_3: 154825525-154833160 Lactuca sativa
Lsat_1_v5_gn_3_98040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 154828161-154833160 Lactuca sativa
Lsat_1_v5_gn_3_98040 5.0kb downstream 5.0kb downstream 7636   true Lsat_1_v8_lg_3: 154820525-154828160 Lactuca sativa
Lsat_1_v5_gn_3_98040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 154820525-154825524 Lactuca sativa
Lsat_1_v5_gn_3_98040 10.0kb upstream 10.0kb upstream 12636   true Lsat_1_v8_lg_3: 154825525-154838160 Lactuca sativa
Lsat_1_v5_gn_3_98040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 154828161-154838160 Lactuca sativa
Lsat_1_v5_gn_3_98040 10.0kb downstream 10.0kb downstream 12636   true Lsat_1_v8_lg_3: 154815525-154828160 Lactuca sativa
Lsat_1_v5_gn_3_98040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 154815525-154825524 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471945 5263 Asterids View MSA
123739303 5271 Pentapetalae View MSA
122790193 5272 Eudicot View MSA
122045240 5273 Angiosperm View MSA
121344088 5274 Embryophyte View MSA
123427303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain