Gene : Lsat_1_v5_gn_4_100420 L. sativa V8
Defline:  (1 of 29) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  2885
Name:  ? Lsat_1_v5_gn_4_100420 Secondary Identifier:  ? PAC:38931403
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_100420 0.5kb upstream 0.5kb upstream 1107   true Lsat_1_v8_lg_4: 169060159-169061265 Lactuca sativa
Lsat_1_v5_gn_4_100420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 169060766-169061265 Lactuca sativa
Lsat_1_v5_gn_4_100420 0.5kb downstream 0.5kb downstream 1107   true Lsat_1_v8_lg_4: 169059659-169060765 Lactuca sativa
Lsat_1_v5_gn_4_100420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 169059659-169060158 Lactuca sativa
Lsat_1_v5_gn_4_100420 1.0kb upstream 1.0kb upstream 1607   true Lsat_1_v8_lg_4: 169060159-169061765 Lactuca sativa
Lsat_1_v5_gn_4_100420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 169060766-169061765 Lactuca sativa
Lsat_1_v5_gn_4_100420 1.0kb downstream 1.0kb downstream 1607   true Lsat_1_v8_lg_4: 169059159-169060765 Lactuca sativa
Lsat_1_v5_gn_4_100420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 169059159-169060158 Lactuca sativa
Lsat_1_v5_gn_4_100420 2.0kb upstream 2.0kb upstream 2607   true Lsat_1_v8_lg_4: 169060159-169062765 Lactuca sativa
Lsat_1_v5_gn_4_100420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 169060766-169062765 Lactuca sativa
Lsat_1_v5_gn_4_100420 2.0kb downstream 2.0kb downstream 2607   true Lsat_1_v8_lg_4: 169058159-169060765 Lactuca sativa
Lsat_1_v5_gn_4_100420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 169058159-169060158 Lactuca sativa
Lsat_1_v5_gn_4_100420 5.0kb upstream 5.0kb upstream 5607   true Lsat_1_v8_lg_4: 169060159-169065765 Lactuca sativa
Lsat_1_v5_gn_4_100420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 169060766-169065765 Lactuca sativa
Lsat_1_v5_gn_4_100420 5.0kb downstream 5.0kb downstream 5607   true Lsat_1_v8_lg_4: 169055159-169060765 Lactuca sativa
Lsat_1_v5_gn_4_100420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 169055159-169060158 Lactuca sativa
Lsat_1_v5_gn_4_100420 10.0kb upstream 10.0kb upstream 10607   true Lsat_1_v8_lg_4: 169060159-169070765 Lactuca sativa
Lsat_1_v5_gn_4_100420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 169060766-169070765 Lactuca sativa
Lsat_1_v5_gn_4_100420 10.0kb downstream 10.0kb downstream 10607   true Lsat_1_v8_lg_4: 169050159-169060765 Lactuca sativa
Lsat_1_v5_gn_4_100420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 169050159-169060158 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475407 5263 Asterids View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain