Gene : Lsat_1_v5_gn_4_102000 L. sativa V8
Defline:  (1 of 1) KOG2101 - Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s) Genomic Order:  2954
Name:  ? Lsat_1_v5_gn_4_102000 Secondary Identifier:  ? PAC:38930896
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_102000 0.5kb upstream 0.5kb upstream 5811   true Lsat_1_v8_lg_4: 173873498-173879308 Lactuca sativa
Lsat_1_v5_gn_4_102000 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 173878809-173879308 Lactuca sativa
Lsat_1_v5_gn_4_102000 0.5kb downstream 0.5kb downstream 5811   true Lsat_1_v8_lg_4: 173872998-173878808 Lactuca sativa
Lsat_1_v5_gn_4_102000 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 173872998-173873497 Lactuca sativa
Lsat_1_v5_gn_4_102000 1.0kb upstream 1.0kb upstream 6311   true Lsat_1_v8_lg_4: 173873498-173879808 Lactuca sativa
Lsat_1_v5_gn_4_102000 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 173878809-173879808 Lactuca sativa
Lsat_1_v5_gn_4_102000 1.0kb downstream 1.0kb downstream 6311   true Lsat_1_v8_lg_4: 173872498-173878808 Lactuca sativa
Lsat_1_v5_gn_4_102000 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 173872498-173873497 Lactuca sativa
Lsat_1_v5_gn_4_102000 2.0kb upstream 2.0kb upstream 7311   true Lsat_1_v8_lg_4: 173873498-173880808 Lactuca sativa
Lsat_1_v5_gn_4_102000 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 173878809-173880808 Lactuca sativa
Lsat_1_v5_gn_4_102000 2.0kb downstream 2.0kb downstream 7311   true Lsat_1_v8_lg_4: 173871498-173878808 Lactuca sativa
Lsat_1_v5_gn_4_102000 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 173871498-173873497 Lactuca sativa
Lsat_1_v5_gn_4_102000 5.0kb upstream 5.0kb upstream 10311   true Lsat_1_v8_lg_4: 173873498-173883808 Lactuca sativa
Lsat_1_v5_gn_4_102000 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 173878809-173883808 Lactuca sativa
Lsat_1_v5_gn_4_102000 5.0kb downstream 5.0kb downstream 10311   true Lsat_1_v8_lg_4: 173868498-173878808 Lactuca sativa
Lsat_1_v5_gn_4_102000 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 173868498-173873497 Lactuca sativa
Lsat_1_v5_gn_4_102000 10.0kb upstream 10.0kb upstream 15311   true Lsat_1_v8_lg_4: 173873498-173888808 Lactuca sativa
Lsat_1_v5_gn_4_102000 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 173878809-173888808 Lactuca sativa
Lsat_1_v5_gn_4_102000 10.0kb downstream 10.0kb downstream 15311   true Lsat_1_v8_lg_4: 173863498-173878808 Lactuca sativa
Lsat_1_v5_gn_4_102000 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 173863498-173873497 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468580 5263 Asterids View MSA
123739237 5271 Pentapetalae View MSA
122786426 5272 Eudicot View MSA
122041700 5273 Angiosperm View MSA
121349142 5274 Embryophyte View MSA
123426415 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain