Gene : Lsat_1_v5_gn_4_104420 L. sativa V8
Defline:  (1 of 1) PTHR31734:SF12 - AUXIN-RESPONSIVE PROTEIN IAA19-RELATED Genomic Order:  2995
Name:  ? Lsat_1_v5_gn_4_104420 Secondary Identifier:  ? PAC:38929712
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_104420 0.5kb upstream 0.5kb upstream 4217   true Lsat_1_v8_lg_4: 176388454-176392670 Lactuca sativa
Lsat_1_v5_gn_4_104420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 176388454-176388953 Lactuca sativa
Lsat_1_v5_gn_4_104420 0.5kb downstream 0.5kb downstream 4217   true Lsat_1_v8_lg_4: 176388954-176393170 Lactuca sativa
Lsat_1_v5_gn_4_104420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 176392671-176393170 Lactuca sativa
Lsat_1_v5_gn_4_104420 1.0kb upstream 1.0kb upstream 4717   true Lsat_1_v8_lg_4: 176387954-176392670 Lactuca sativa
Lsat_1_v5_gn_4_104420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 176387954-176388953 Lactuca sativa
Lsat_1_v5_gn_4_104420 1.0kb downstream 1.0kb downstream 4717   true Lsat_1_v8_lg_4: 176388954-176393670 Lactuca sativa
Lsat_1_v5_gn_4_104420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 176392671-176393670 Lactuca sativa
Lsat_1_v5_gn_4_104420 2.0kb upstream 2.0kb upstream 5717   true Lsat_1_v8_lg_4: 176386954-176392670 Lactuca sativa
Lsat_1_v5_gn_4_104420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 176386954-176388953 Lactuca sativa
Lsat_1_v5_gn_4_104420 2.0kb downstream 2.0kb downstream 5717   true Lsat_1_v8_lg_4: 176388954-176394670 Lactuca sativa
Lsat_1_v5_gn_4_104420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 176392671-176394670 Lactuca sativa
Lsat_1_v5_gn_4_104420 5.0kb upstream 5.0kb upstream 8717   true Lsat_1_v8_lg_4: 176383954-176392670 Lactuca sativa
Lsat_1_v5_gn_4_104420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 176383954-176388953 Lactuca sativa
Lsat_1_v5_gn_4_104420 5.0kb downstream 5.0kb downstream 8717   true Lsat_1_v8_lg_4: 176388954-176397670 Lactuca sativa
Lsat_1_v5_gn_4_104420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 176392671-176397670 Lactuca sativa
Lsat_1_v5_gn_4_104420 10.0kb upstream 10.0kb upstream 13717   true Lsat_1_v8_lg_4: 176378954-176392670 Lactuca sativa
Lsat_1_v5_gn_4_104420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 176378954-176388953 Lactuca sativa
Lsat_1_v5_gn_4_104420 10.0kb downstream 10.0kb downstream 13717   true Lsat_1_v8_lg_4: 176388954-176402670 Lactuca sativa
Lsat_1_v5_gn_4_104420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 176392671-176402670 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480681 5263 Asterids View MSA
123747255 5271 Pentapetalae View MSA
122788195 5272 Eudicot View MSA
122050292 5273 Angiosperm View MSA
121311842 5274 Embryophyte View MSA
123349083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain