Gene : Lsat_1_v5_gn_4_112420 L. sativa V8
Defline:  (1 of 45) PF10250 - GDP-fucose protein O-fucosyltransferase (O-FucT) Genomic Order:  3249
Name:  ? Lsat_1_v5_gn_4_112420 Secondary Identifier:  ? PAC:38929913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_112420 0.5kb upstream 0.5kb upstream 5056   true Lsat_1_v8_lg_4: 198338107-198343162 Lactuca sativa
Lsat_1_v5_gn_4_112420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 198338107-198338606 Lactuca sativa
Lsat_1_v5_gn_4_112420 0.5kb downstream 0.5kb downstream 5056   true Lsat_1_v8_lg_4: 198338607-198343662 Lactuca sativa
Lsat_1_v5_gn_4_112420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 198343163-198343662 Lactuca sativa
Lsat_1_v5_gn_4_112420 1.0kb upstream 1.0kb upstream 5556   true Lsat_1_v8_lg_4: 198337607-198343162 Lactuca sativa
Lsat_1_v5_gn_4_112420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 198337607-198338606 Lactuca sativa
Lsat_1_v5_gn_4_112420 1.0kb downstream 1.0kb downstream 5556   true Lsat_1_v8_lg_4: 198338607-198344162 Lactuca sativa
Lsat_1_v5_gn_4_112420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 198343163-198344162 Lactuca sativa
Lsat_1_v5_gn_4_112420 2.0kb upstream 2.0kb upstream 6556   true Lsat_1_v8_lg_4: 198336607-198343162 Lactuca sativa
Lsat_1_v5_gn_4_112420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 198336607-198338606 Lactuca sativa
Lsat_1_v5_gn_4_112420 2.0kb downstream 2.0kb downstream 6556   true Lsat_1_v8_lg_4: 198338607-198345162 Lactuca sativa
Lsat_1_v5_gn_4_112420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 198343163-198345162 Lactuca sativa
Lsat_1_v5_gn_4_112420 5.0kb upstream 5.0kb upstream 9556   true Lsat_1_v8_lg_4: 198333607-198343162 Lactuca sativa
Lsat_1_v5_gn_4_112420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 198333607-198338606 Lactuca sativa
Lsat_1_v5_gn_4_112420 5.0kb downstream 5.0kb downstream 9556   true Lsat_1_v8_lg_4: 198338607-198348162 Lactuca sativa
Lsat_1_v5_gn_4_112420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 198343163-198348162 Lactuca sativa
Lsat_1_v5_gn_4_112420 10.0kb upstream 10.0kb upstream 14556   true Lsat_1_v8_lg_4: 198328607-198343162 Lactuca sativa
Lsat_1_v5_gn_4_112420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 198328607-198338606 Lactuca sativa
Lsat_1_v5_gn_4_112420 10.0kb downstream 10.0kb downstream 14556   true Lsat_1_v8_lg_4: 198338607-198353162 Lactuca sativa
Lsat_1_v5_gn_4_112420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 198343163-198353162 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466444 5263 Asterids View MSA
123749174 5271 Pentapetalae View MSA
122786787 5272 Eudicot View MSA
122050382 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain