Gene : Lsat_1_v5_gn_4_117181 L. sativa V8
Defline:  (1 of 2) PTHR24055//PTHR24055:SF205 - MITOGEN-ACTIVATED PROTEIN KINASE // MITOGEN-ACTIVATED PROTEIN KINASE 1-RELATED Genomic Order:  3372
Name:  ? Lsat_1_v5_gn_4_117181 Secondary Identifier:  ? PAC:38931737
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_117181 0.5kb upstream 0.5kb upstream 3726   true Lsat_1_v8_lg_4: 208105012-208108737 Lactuca sativa
Lsat_1_v5_gn_4_117181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 208108238-208108737 Lactuca sativa
Lsat_1_v5_gn_4_117181 0.5kb downstream 0.5kb downstream 3726   true Lsat_1_v8_lg_4: 208104512-208108237 Lactuca sativa
Lsat_1_v5_gn_4_117181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 208104512-208105011 Lactuca sativa
Lsat_1_v5_gn_4_117181 1.0kb upstream 1.0kb upstream 4226   true Lsat_1_v8_lg_4: 208105012-208109237 Lactuca sativa
Lsat_1_v5_gn_4_117181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 208108238-208109237 Lactuca sativa
Lsat_1_v5_gn_4_117181 1.0kb downstream 1.0kb downstream 4226   true Lsat_1_v8_lg_4: 208104012-208108237 Lactuca sativa
Lsat_1_v5_gn_4_117181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 208104012-208105011 Lactuca sativa
Lsat_1_v5_gn_4_117181 2.0kb upstream 2.0kb upstream 5226   true Lsat_1_v8_lg_4: 208105012-208110237 Lactuca sativa
Lsat_1_v5_gn_4_117181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 208108238-208110237 Lactuca sativa
Lsat_1_v5_gn_4_117181 2.0kb downstream 2.0kb downstream 5226   true Lsat_1_v8_lg_4: 208103012-208108237 Lactuca sativa
Lsat_1_v5_gn_4_117181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 208103012-208105011 Lactuca sativa
Lsat_1_v5_gn_4_117181 5.0kb upstream 5.0kb upstream 8226   true Lsat_1_v8_lg_4: 208105012-208113237 Lactuca sativa
Lsat_1_v5_gn_4_117181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 208108238-208113237 Lactuca sativa
Lsat_1_v5_gn_4_117181 5.0kb downstream 5.0kb downstream 8226   true Lsat_1_v8_lg_4: 208100012-208108237 Lactuca sativa
Lsat_1_v5_gn_4_117181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 208100012-208105011 Lactuca sativa
Lsat_1_v5_gn_4_117181 10.0kb upstream 10.0kb upstream 13226   true Lsat_1_v8_lg_4: 208105012-208118237 Lactuca sativa
Lsat_1_v5_gn_4_117181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 208108238-208118237 Lactuca sativa
Lsat_1_v5_gn_4_117181 10.0kb downstream 10.0kb downstream 13226   true Lsat_1_v8_lg_4: 208095012-208108237 Lactuca sativa
Lsat_1_v5_gn_4_117181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 208095012-208105011 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478027 5263 Asterids View MSA
123752459 5271 Pentapetalae View MSA
122793937 5272 Eudicot View MSA
122041657 5273 Angiosperm View MSA
121346969 5274 Embryophyte View MSA
123428294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain