Gene : Lsat_1_v5_gn_4_177060 L. sativa V8
Defline:  (1 of 1) PTHR10091//PTHR10091:SF10 - ALDOSE-1-EPIMERASE // ALDOSE 1-EPIMERASE-RELATED Genomic Order:  5006
Name:  ? Lsat_1_v5_gn_4_177060 Secondary Identifier:  ? PAC:38928212
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY66-422 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_177060 0.5kb upstream 0.5kb upstream 5373   true Lsat_1_v8_lg_4: 366634537-366639909 Lactuca sativa
Lsat_1_v5_gn_4_177060 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 366639410-366639909 Lactuca sativa
Lsat_1_v5_gn_4_177060 0.5kb downstream 0.5kb downstream 5373   true Lsat_1_v8_lg_4: 366634037-366639409 Lactuca sativa
Lsat_1_v5_gn_4_177060 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 366634037-366634536 Lactuca sativa
Lsat_1_v5_gn_4_177060 1.0kb upstream 1.0kb upstream 5873   true Lsat_1_v8_lg_4: 366634537-366640409 Lactuca sativa
Lsat_1_v5_gn_4_177060 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 366639410-366640409 Lactuca sativa
Lsat_1_v5_gn_4_177060 1.0kb downstream 1.0kb downstream 5873   true Lsat_1_v8_lg_4: 366633537-366639409 Lactuca sativa
Lsat_1_v5_gn_4_177060 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 366633537-366634536 Lactuca sativa
Lsat_1_v5_gn_4_177060 2.0kb upstream 2.0kb upstream 6873   true Lsat_1_v8_lg_4: 366634537-366641409 Lactuca sativa
Lsat_1_v5_gn_4_177060 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 366639410-366641409 Lactuca sativa
Lsat_1_v5_gn_4_177060 2.0kb downstream 2.0kb downstream 6873   true Lsat_1_v8_lg_4: 366632537-366639409 Lactuca sativa
Lsat_1_v5_gn_4_177060 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 366632537-366634536 Lactuca sativa
Lsat_1_v5_gn_4_177060 5.0kb upstream 5.0kb upstream 9873   true Lsat_1_v8_lg_4: 366634537-366644409 Lactuca sativa
Lsat_1_v5_gn_4_177060 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 366639410-366644409 Lactuca sativa
Lsat_1_v5_gn_4_177060 5.0kb downstream 5.0kb downstream 9873   true Lsat_1_v8_lg_4: 366629537-366639409 Lactuca sativa
Lsat_1_v5_gn_4_177060 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 366629537-366634536 Lactuca sativa
Lsat_1_v5_gn_4_177060 10.0kb upstream 10.0kb upstream 14873   true Lsat_1_v8_lg_4: 366634537-366649409 Lactuca sativa
Lsat_1_v5_gn_4_177060 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 366639410-366649409 Lactuca sativa
Lsat_1_v5_gn_4_177060 10.0kb downstream 10.0kb downstream 14873   true Lsat_1_v8_lg_4: 366624537-366639409 Lactuca sativa
Lsat_1_v5_gn_4_177060 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 366624537-366634536 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478155 5263 Asterids View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain