Gene : Lsat_1_v5_gn_4_185681 L. sativa V8
Defline:  (1 of 2) K02961 - small subunit ribosomal protein S17 (RP-S17, MRPS17, rpsQ) Genomic Order:  5200
Name:  ? Lsat_1_v5_gn_4_185681 Secondary Identifier:  ? PAC:38931605
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_185681 0.5kb upstream 0.5kb upstream 2462   true Lsat_1_v8_lg_4: 374852634-374855095 Lactuca sativa
Lsat_1_v5_gn_4_185681 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 374852634-374853133 Lactuca sativa
Lsat_1_v5_gn_4_185681 0.5kb downstream 0.5kb downstream 2462   true Lsat_1_v8_lg_4: 374853134-374855595 Lactuca sativa
Lsat_1_v5_gn_4_185681 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 374855096-374855595 Lactuca sativa
Lsat_1_v5_gn_4_185681 1.0kb upstream 1.0kb upstream 2962   true Lsat_1_v8_lg_4: 374852134-374855095 Lactuca sativa
Lsat_1_v5_gn_4_185681 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 374852134-374853133 Lactuca sativa
Lsat_1_v5_gn_4_185681 1.0kb downstream 1.0kb downstream 2962   true Lsat_1_v8_lg_4: 374853134-374856095 Lactuca sativa
Lsat_1_v5_gn_4_185681 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 374855096-374856095 Lactuca sativa
Lsat_1_v5_gn_4_185681 2.0kb upstream 2.0kb upstream 3962   true Lsat_1_v8_lg_4: 374851134-374855095 Lactuca sativa
Lsat_1_v5_gn_4_185681 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 374851134-374853133 Lactuca sativa
Lsat_1_v5_gn_4_185681 2.0kb downstream 2.0kb downstream 3962   true Lsat_1_v8_lg_4: 374853134-374857095 Lactuca sativa
Lsat_1_v5_gn_4_185681 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 374855096-374857095 Lactuca sativa
Lsat_1_v5_gn_4_185681 5.0kb upstream 5.0kb upstream 6962   true Lsat_1_v8_lg_4: 374848134-374855095 Lactuca sativa
Lsat_1_v5_gn_4_185681 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 374848134-374853133 Lactuca sativa
Lsat_1_v5_gn_4_185681 5.0kb downstream 5.0kb downstream 6962   true Lsat_1_v8_lg_4: 374853134-374860095 Lactuca sativa
Lsat_1_v5_gn_4_185681 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 374855096-374860095 Lactuca sativa
Lsat_1_v5_gn_4_185681 10.0kb upstream 10.0kb upstream 11962   true Lsat_1_v8_lg_4: 374843134-374855095 Lactuca sativa
Lsat_1_v5_gn_4_185681 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 374843134-374853133 Lactuca sativa
Lsat_1_v5_gn_4_185681 10.0kb downstream 10.0kb downstream 11962   true Lsat_1_v8_lg_4: 374853134-374865095 Lactuca sativa
Lsat_1_v5_gn_4_185681 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 374855096-374865095 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472293 5263 Asterids View MSA
123744369 5271 Pentapetalae View MSA
122786157 5272 Eudicot View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain