Gene : Lsat_1_v5_gn_4_20780 L. sativa V8
Defline:  (1 of 1) PTHR35705//PTHR35705:SF2 - FAMILY NOT NAMED // WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 2 Genomic Order:  601
Name:  ? Lsat_1_v5_gn_4_20780 Secondary Identifier:  ? PAC:38934631
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_20780 0.5kb upstream 0.5kb upstream 3218   true Lsat_1_v8_lg_4: 31693614-31696831 Lactuca sativa
Lsat_1_v5_gn_4_20780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 31693614-31694113 Lactuca sativa
Lsat_1_v5_gn_4_20780 0.5kb downstream 0.5kb downstream 3218   true Lsat_1_v8_lg_4: 31694114-31697331 Lactuca sativa
Lsat_1_v5_gn_4_20780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 31696832-31697331 Lactuca sativa
Lsat_1_v5_gn_4_20780 1.0kb upstream 1.0kb upstream 3718   true Lsat_1_v8_lg_4: 31693114-31696831 Lactuca sativa
Lsat_1_v5_gn_4_20780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 31693114-31694113 Lactuca sativa
Lsat_1_v5_gn_4_20780 1.0kb downstream 1.0kb downstream 3718   true Lsat_1_v8_lg_4: 31694114-31697831 Lactuca sativa
Lsat_1_v5_gn_4_20780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 31696832-31697831 Lactuca sativa
Lsat_1_v5_gn_4_20780 2.0kb upstream 2.0kb upstream 4718   true Lsat_1_v8_lg_4: 31692114-31696831 Lactuca sativa
Lsat_1_v5_gn_4_20780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 31692114-31694113 Lactuca sativa
Lsat_1_v5_gn_4_20780 2.0kb downstream 2.0kb downstream 4718   true Lsat_1_v8_lg_4: 31694114-31698831 Lactuca sativa
Lsat_1_v5_gn_4_20780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 31696832-31698831 Lactuca sativa
Lsat_1_v5_gn_4_20780 5.0kb upstream 5.0kb upstream 7718   true Lsat_1_v8_lg_4: 31689114-31696831 Lactuca sativa
Lsat_1_v5_gn_4_20780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 31689114-31694113 Lactuca sativa
Lsat_1_v5_gn_4_20780 5.0kb downstream 5.0kb downstream 7718   true Lsat_1_v8_lg_4: 31694114-31701831 Lactuca sativa
Lsat_1_v5_gn_4_20780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 31696832-31701831 Lactuca sativa
Lsat_1_v5_gn_4_20780 10.0kb upstream 10.0kb upstream 12718   true Lsat_1_v8_lg_4: 31684114-31696831 Lactuca sativa
Lsat_1_v5_gn_4_20780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 31684114-31694113 Lactuca sativa
Lsat_1_v5_gn_4_20780 10.0kb downstream 10.0kb downstream 12718   true Lsat_1_v8_lg_4: 31694114-31706831 Lactuca sativa
Lsat_1_v5_gn_4_20780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 31696832-31706831 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475773 5263 Asterids View MSA
123737146 5271 Pentapetalae View MSA
122786197 5272 Eudicot View MSA
122042229 5273 Angiosperm View MSA
121309938 5274 Embryophyte View MSA
123347566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain