Gene : Lsat_1_v5_gn_4_19561 L. sativa V8
Defline:  (1 of 1) PTHR12565:SF77 - TRANSCRIPTION FACTOR AIG1-RELATED Genomic Order:  533
Name:  ? Lsat_1_v5_gn_4_19561 Secondary Identifier:  ? PAC:38933635
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_19561 0.5kb upstream 0.5kb upstream 2923   true Lsat_1_v8_lg_4: 27853796-27856718 Lactuca sativa
Lsat_1_v5_gn_4_19561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 27856219-27856718 Lactuca sativa
Lsat_1_v5_gn_4_19561 0.5kb downstream 0.5kb downstream 2923   true Lsat_1_v8_lg_4: 27853296-27856218 Lactuca sativa
Lsat_1_v5_gn_4_19561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 27853296-27853795 Lactuca sativa
Lsat_1_v5_gn_4_19561 1.0kb upstream 1.0kb upstream 3423   true Lsat_1_v8_lg_4: 27853796-27857218 Lactuca sativa
Lsat_1_v5_gn_4_19561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 27856219-27857218 Lactuca sativa
Lsat_1_v5_gn_4_19561 1.0kb downstream 1.0kb downstream 3423   true Lsat_1_v8_lg_4: 27852796-27856218 Lactuca sativa
Lsat_1_v5_gn_4_19561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 27852796-27853795 Lactuca sativa
Lsat_1_v5_gn_4_19561 2.0kb upstream 2.0kb upstream 4423   true Lsat_1_v8_lg_4: 27853796-27858218 Lactuca sativa
Lsat_1_v5_gn_4_19561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 27856219-27858218 Lactuca sativa
Lsat_1_v5_gn_4_19561 2.0kb downstream 2.0kb downstream 4423   true Lsat_1_v8_lg_4: 27851796-27856218 Lactuca sativa
Lsat_1_v5_gn_4_19561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 27851796-27853795 Lactuca sativa
Lsat_1_v5_gn_4_19561 5.0kb upstream 5.0kb upstream 7423   true Lsat_1_v8_lg_4: 27853796-27861218 Lactuca sativa
Lsat_1_v5_gn_4_19561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 27856219-27861218 Lactuca sativa
Lsat_1_v5_gn_4_19561 5.0kb downstream 5.0kb downstream 7423   true Lsat_1_v8_lg_4: 27848796-27856218 Lactuca sativa
Lsat_1_v5_gn_4_19561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 27848796-27853795 Lactuca sativa
Lsat_1_v5_gn_4_19561 10.0kb upstream 10.0kb upstream 12423   true Lsat_1_v8_lg_4: 27853796-27866218 Lactuca sativa
Lsat_1_v5_gn_4_19561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 27856219-27866218 Lactuca sativa
Lsat_1_v5_gn_4_19561 10.0kb downstream 10.0kb downstream 12423   true Lsat_1_v8_lg_4: 27843796-27856218 Lactuca sativa
Lsat_1_v5_gn_4_19561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 27843796-27853795 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480053 5263 Asterids View MSA
123749080 5271 Pentapetalae View MSA
122789211 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain