Gene : Lsat_1_v5_gn_4_2480 L. sativa V8
Defline:  (1 of 3) K10251 - 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase (HSD17B12, KAR, IFA38) Genomic Order:  104
Name:  ? Lsat_1_v5_gn_4_2480 Secondary Identifier:  ? PAC:38934346
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5080 Lactuca sativa pathologic  
Lsativa PWY-6433 Lactuca sativa pathologic  
Lsativa PWY-6598 Lactuca sativa pathologic  
Lsativa PWY-7036 Lactuca sativa pathologic  
Lsativa PWY-7601 Lactuca sativa pathologic  
Lsativa PWY-7606 Lactuca sativa pathologic  
Lsativa PWY-7619 Lactuca sativa pathologic  
Lsativa PWY-7726 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_2480 0.5kb upstream 0.5kb upstream 1985   true Lsat_1_v8_lg_4: 5055506-5057490 Lactuca sativa
Lsat_1_v5_gn_4_2480 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 5055506-5056005 Lactuca sativa
Lsat_1_v5_gn_4_2480 0.5kb downstream 0.5kb downstream 1985   true Lsat_1_v8_lg_4: 5056006-5057990 Lactuca sativa
Lsat_1_v5_gn_4_2480 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 5057491-5057990 Lactuca sativa
Lsat_1_v5_gn_4_2480 1.0kb upstream 1.0kb upstream 2485   true Lsat_1_v8_lg_4: 5055006-5057490 Lactuca sativa
Lsat_1_v5_gn_4_2480 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 5055006-5056005 Lactuca sativa
Lsat_1_v5_gn_4_2480 1.0kb downstream 1.0kb downstream 2485   true Lsat_1_v8_lg_4: 5056006-5058490 Lactuca sativa
Lsat_1_v5_gn_4_2480 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 5057491-5058490 Lactuca sativa
Lsat_1_v5_gn_4_2480 2.0kb upstream 2.0kb upstream 3485   true Lsat_1_v8_lg_4: 5054006-5057490 Lactuca sativa
Lsat_1_v5_gn_4_2480 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 5054006-5056005 Lactuca sativa
Lsat_1_v5_gn_4_2480 2.0kb downstream 2.0kb downstream 3485   true Lsat_1_v8_lg_4: 5056006-5059490 Lactuca sativa
Lsat_1_v5_gn_4_2480 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 5057491-5059490 Lactuca sativa
Lsat_1_v5_gn_4_2480 5.0kb upstream 5.0kb upstream 6485   true Lsat_1_v8_lg_4: 5051006-5057490 Lactuca sativa
Lsat_1_v5_gn_4_2480 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 5051006-5056005 Lactuca sativa
Lsat_1_v5_gn_4_2480 5.0kb downstream 5.0kb downstream 6485   true Lsat_1_v8_lg_4: 5056006-5062490 Lactuca sativa
Lsat_1_v5_gn_4_2480 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 5057491-5062490 Lactuca sativa
Lsat_1_v5_gn_4_2480 10.0kb upstream 10.0kb upstream 11485   true Lsat_1_v8_lg_4: 5046006-5057490 Lactuca sativa
Lsat_1_v5_gn_4_2480 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 5046006-5056005 Lactuca sativa
Lsat_1_v5_gn_4_2480 10.0kb downstream 10.0kb downstream 11485   true Lsat_1_v8_lg_4: 5056006-5067490 Lactuca sativa
Lsat_1_v5_gn_4_2480 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 5057491-5067490 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479315 5263 Asterids View MSA
123737536 5271 Pentapetalae View MSA
122787991 5272 Eudicot View MSA
122050087 5273 Angiosperm View MSA
123428985 5275 Viridiplantae View MSA
121351563 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain