Gene : Lsat_1_v5_gn_4_153381 L. sativa V8
Defline:  (1 of 3) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  4285
Name:  ? Lsat_1_v5_gn_4_153381 Secondary Identifier:  ? PAC:38929050
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_153381 0.5kb upstream 0.5kb upstream 10617   true Lsat_1_v8_lg_4: 301498781-301509397 Lactuca sativa
Lsat_1_v5_gn_4_153381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 301498781-301499280 Lactuca sativa
Lsat_1_v5_gn_4_153381 0.5kb downstream 0.5kb downstream 10617   true Lsat_1_v8_lg_4: 301499281-301509897 Lactuca sativa
Lsat_1_v5_gn_4_153381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 301509398-301509897 Lactuca sativa
Lsat_1_v5_gn_4_153381 1.0kb upstream 1.0kb upstream 11117   true Lsat_1_v8_lg_4: 301498281-301509397 Lactuca sativa
Lsat_1_v5_gn_4_153381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 301498281-301499280 Lactuca sativa
Lsat_1_v5_gn_4_153381 1.0kb downstream 1.0kb downstream 11117   true Lsat_1_v8_lg_4: 301499281-301510397 Lactuca sativa
Lsat_1_v5_gn_4_153381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 301509398-301510397 Lactuca sativa
Lsat_1_v5_gn_4_153381 2.0kb upstream 2.0kb upstream 12117   true Lsat_1_v8_lg_4: 301497281-301509397 Lactuca sativa
Lsat_1_v5_gn_4_153381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 301497281-301499280 Lactuca sativa
Lsat_1_v5_gn_4_153381 2.0kb downstream 2.0kb downstream 12117   true Lsat_1_v8_lg_4: 301499281-301511397 Lactuca sativa
Lsat_1_v5_gn_4_153381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 301509398-301511397 Lactuca sativa
Lsat_1_v5_gn_4_153381 5.0kb upstream 5.0kb upstream 15117   true Lsat_1_v8_lg_4: 301494281-301509397 Lactuca sativa
Lsat_1_v5_gn_4_153381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 301494281-301499280 Lactuca sativa
Lsat_1_v5_gn_4_153381 5.0kb downstream 5.0kb downstream 15117   true Lsat_1_v8_lg_4: 301499281-301514397 Lactuca sativa
Lsat_1_v5_gn_4_153381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 301509398-301514397 Lactuca sativa
Lsat_1_v5_gn_4_153381 10.0kb upstream 10.0kb upstream 20117   true Lsat_1_v8_lg_4: 301489281-301509397 Lactuca sativa
Lsat_1_v5_gn_4_153381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 301489281-301499280 Lactuca sativa
Lsat_1_v5_gn_4_153381 10.0kb downstream 10.0kb downstream 20117   true Lsat_1_v8_lg_4: 301499281-301519397 Lactuca sativa
Lsat_1_v5_gn_4_153381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 301509398-301519397 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121443788 5263 Asterids Singleton cluster - no MSA
123753064 5271 Pentapetalae View MSA
122797129 5272 Eudicot View MSA
122050030 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349493 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain