Gene : Lsat_1_v5_gn_4_162381 L. sativa V8
Defline:  (1 of 26) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  4550
Name:  ? Lsat_1_v5_gn_4_162381 Secondary Identifier:  ? PAC:38930234
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_162381 0.5kb upstream 0.5kb upstream 4250   true Lsat_1_v8_lg_4: 324693025-324697274 Lactuca sativa
Lsat_1_v5_gn_4_162381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 324696775-324697274 Lactuca sativa
Lsat_1_v5_gn_4_162381 0.5kb downstream 0.5kb downstream 4250   true Lsat_1_v8_lg_4: 324692525-324696774 Lactuca sativa
Lsat_1_v5_gn_4_162381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 324692525-324693024 Lactuca sativa
Lsat_1_v5_gn_4_162381 1.0kb upstream 1.0kb upstream 4750   true Lsat_1_v8_lg_4: 324693025-324697774 Lactuca sativa
Lsat_1_v5_gn_4_162381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 324696775-324697774 Lactuca sativa
Lsat_1_v5_gn_4_162381 1.0kb downstream 1.0kb downstream 4750   true Lsat_1_v8_lg_4: 324692025-324696774 Lactuca sativa
Lsat_1_v5_gn_4_162381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 324692025-324693024 Lactuca sativa
Lsat_1_v5_gn_4_162381 2.0kb upstream 2.0kb upstream 5750   true Lsat_1_v8_lg_4: 324693025-324698774 Lactuca sativa
Lsat_1_v5_gn_4_162381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 324696775-324698774 Lactuca sativa
Lsat_1_v5_gn_4_162381 2.0kb downstream 2.0kb downstream 5750   true Lsat_1_v8_lg_4: 324691025-324696774 Lactuca sativa
Lsat_1_v5_gn_4_162381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 324691025-324693024 Lactuca sativa
Lsat_1_v5_gn_4_162381 5.0kb upstream 5.0kb upstream 8750   true Lsat_1_v8_lg_4: 324693025-324701774 Lactuca sativa
Lsat_1_v5_gn_4_162381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 324696775-324701774 Lactuca sativa
Lsat_1_v5_gn_4_162381 5.0kb downstream 5.0kb downstream 8750   true Lsat_1_v8_lg_4: 324688025-324696774 Lactuca sativa
Lsat_1_v5_gn_4_162381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 324688025-324693024 Lactuca sativa
Lsat_1_v5_gn_4_162381 10.0kb upstream 10.0kb upstream 13750   true Lsat_1_v8_lg_4: 324693025-324706774 Lactuca sativa
Lsat_1_v5_gn_4_162381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 324696775-324706774 Lactuca sativa
Lsat_1_v5_gn_4_162381 10.0kb downstream 10.0kb downstream 13750   true Lsat_1_v8_lg_4: 324683025-324696774 Lactuca sativa
Lsat_1_v5_gn_4_162381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 324683025-324693024 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470224 5263 Asterids View MSA
123750839 5271 Pentapetalae View MSA
122787854 5272 Eudicot View MSA
122046367 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain