Gene : Lsat_1_v5_gn_4_16300 L. sativa V8
Defline:  (1 of 14) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  457
Name:  ? Lsat_1_v5_gn_4_16300 Secondary Identifier:  ? PAC:38930996
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_16300 0.5kb upstream 0.5kb upstream 3218   true Lsat_1_v8_lg_4: 23392333-23395550 Lactuca sativa
Lsat_1_v5_gn_4_16300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 23392333-23392832 Lactuca sativa
Lsat_1_v5_gn_4_16300 0.5kb downstream 0.5kb downstream 3218   true Lsat_1_v8_lg_4: 23392833-23396050 Lactuca sativa
Lsat_1_v5_gn_4_16300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 23395551-23396050 Lactuca sativa
Lsat_1_v5_gn_4_16300 1.0kb upstream 1.0kb upstream 3718   true Lsat_1_v8_lg_4: 23391833-23395550 Lactuca sativa
Lsat_1_v5_gn_4_16300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 23391833-23392832 Lactuca sativa
Lsat_1_v5_gn_4_16300 1.0kb downstream 1.0kb downstream 3718   true Lsat_1_v8_lg_4: 23392833-23396550 Lactuca sativa
Lsat_1_v5_gn_4_16300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 23395551-23396550 Lactuca sativa
Lsat_1_v5_gn_4_16300 2.0kb upstream 2.0kb upstream 4718   true Lsat_1_v8_lg_4: 23390833-23395550 Lactuca sativa
Lsat_1_v5_gn_4_16300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 23390833-23392832 Lactuca sativa
Lsat_1_v5_gn_4_16300 2.0kb downstream 2.0kb downstream 4718   true Lsat_1_v8_lg_4: 23392833-23397550 Lactuca sativa
Lsat_1_v5_gn_4_16300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 23395551-23397550 Lactuca sativa
Lsat_1_v5_gn_4_16300 5.0kb upstream 5.0kb upstream 7718   true Lsat_1_v8_lg_4: 23387833-23395550 Lactuca sativa
Lsat_1_v5_gn_4_16300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 23387833-23392832 Lactuca sativa
Lsat_1_v5_gn_4_16300 5.0kb downstream 5.0kb downstream 7718   true Lsat_1_v8_lg_4: 23392833-23400550 Lactuca sativa
Lsat_1_v5_gn_4_16300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 23395551-23400550 Lactuca sativa
Lsat_1_v5_gn_4_16300 10.0kb upstream 10.0kb upstream 12718   true Lsat_1_v8_lg_4: 23382833-23395550 Lactuca sativa
Lsat_1_v5_gn_4_16300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 23382833-23392832 Lactuca sativa
Lsat_1_v5_gn_4_16300 10.0kb downstream 10.0kb downstream 12718   true Lsat_1_v8_lg_4: 23392833-23405550 Lactuca sativa
Lsat_1_v5_gn_4_16300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 23395551-23405550 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478193 5263 Asterids View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain