Gene : Lsat_1_v5_gn_4_164620 L. sativa V8
Defline:  (1 of 1) PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  4617
Name:  ? Lsat_1_v5_gn_4_164620 Secondary Identifier:  ? PAC:38932624
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_164620 0.5kb upstream 0.5kb upstream 4129   true Lsat_1_v8_lg_4: 331858087-331862215 Lactuca sativa
Lsat_1_v5_gn_4_164620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 331858087-331858586 Lactuca sativa
Lsat_1_v5_gn_4_164620 0.5kb downstream 0.5kb downstream 4129   true Lsat_1_v8_lg_4: 331858587-331862715 Lactuca sativa
Lsat_1_v5_gn_4_164620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 331862216-331862715 Lactuca sativa
Lsat_1_v5_gn_4_164620 1.0kb upstream 1.0kb upstream 4629   true Lsat_1_v8_lg_4: 331857587-331862215 Lactuca sativa
Lsat_1_v5_gn_4_164620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 331857587-331858586 Lactuca sativa
Lsat_1_v5_gn_4_164620 1.0kb downstream 1.0kb downstream 4629   true Lsat_1_v8_lg_4: 331858587-331863215 Lactuca sativa
Lsat_1_v5_gn_4_164620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 331862216-331863215 Lactuca sativa
Lsat_1_v5_gn_4_164620 2.0kb upstream 2.0kb upstream 5629   true Lsat_1_v8_lg_4: 331856587-331862215 Lactuca sativa
Lsat_1_v5_gn_4_164620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 331856587-331858586 Lactuca sativa
Lsat_1_v5_gn_4_164620 2.0kb downstream 2.0kb downstream 5629   true Lsat_1_v8_lg_4: 331858587-331864215 Lactuca sativa
Lsat_1_v5_gn_4_164620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 331862216-331864215 Lactuca sativa
Lsat_1_v5_gn_4_164620 5.0kb upstream 5.0kb upstream 8629   true Lsat_1_v8_lg_4: 331853587-331862215 Lactuca sativa
Lsat_1_v5_gn_4_164620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 331853587-331858586 Lactuca sativa
Lsat_1_v5_gn_4_164620 5.0kb downstream 5.0kb downstream 8629   true Lsat_1_v8_lg_4: 331858587-331867215 Lactuca sativa
Lsat_1_v5_gn_4_164620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 331862216-331867215 Lactuca sativa
Lsat_1_v5_gn_4_164620 10.0kb upstream 10.0kb upstream 13629   true Lsat_1_v8_lg_4: 331848587-331862215 Lactuca sativa
Lsat_1_v5_gn_4_164620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 331848587-331858586 Lactuca sativa
Lsat_1_v5_gn_4_164620 10.0kb downstream 10.0kb downstream 13629   true Lsat_1_v8_lg_4: 331858587-331872215 Lactuca sativa
Lsat_1_v5_gn_4_164620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 331862216-331872215 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026363 5273 Angiosperm View MSA
121474704 5263 Asterids View MSA
123740689 5271 Pentapetalae View MSA
122788659 5272 Eudicot View MSA
121349199 5274 Embryophyte View MSA
123381214 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain