Gene : Lsat_1_v5_gn_4_165921 L. sativa V8
Defline:  (1 of 3) PTHR10015//PTHR10015:SF166 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR B-1 Genomic Order:  4657
Name:  ? Lsat_1_v5_gn_4_165921 Secondary Identifier:  ? PAC:38928243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_165921 0.5kb upstream 0.5kb upstream 2384   true Lsat_1_v8_lg_4: 336579421-336581804 Lactuca sativa
Lsat_1_v5_gn_4_165921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 336579421-336579920 Lactuca sativa
Lsat_1_v5_gn_4_165921 0.5kb downstream 0.5kb downstream 2384   true Lsat_1_v8_lg_4: 336579921-336582304 Lactuca sativa
Lsat_1_v5_gn_4_165921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 336581805-336582304 Lactuca sativa
Lsat_1_v5_gn_4_165921 1.0kb upstream 1.0kb upstream 2884   true Lsat_1_v8_lg_4: 336578921-336581804 Lactuca sativa
Lsat_1_v5_gn_4_165921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 336578921-336579920 Lactuca sativa
Lsat_1_v5_gn_4_165921 1.0kb downstream 1.0kb downstream 2884   true Lsat_1_v8_lg_4: 336579921-336582804 Lactuca sativa
Lsat_1_v5_gn_4_165921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 336581805-336582804 Lactuca sativa
Lsat_1_v5_gn_4_165921 2.0kb upstream 2.0kb upstream 3884   true Lsat_1_v8_lg_4: 336577921-336581804 Lactuca sativa
Lsat_1_v5_gn_4_165921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 336577921-336579920 Lactuca sativa
Lsat_1_v5_gn_4_165921 2.0kb downstream 2.0kb downstream 3884   true Lsat_1_v8_lg_4: 336579921-336583804 Lactuca sativa
Lsat_1_v5_gn_4_165921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 336581805-336583804 Lactuca sativa
Lsat_1_v5_gn_4_165921 5.0kb upstream 5.0kb upstream 6884   true Lsat_1_v8_lg_4: 336574921-336581804 Lactuca sativa
Lsat_1_v5_gn_4_165921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 336574921-336579920 Lactuca sativa
Lsat_1_v5_gn_4_165921 5.0kb downstream 5.0kb downstream 6884   true Lsat_1_v8_lg_4: 336579921-336586804 Lactuca sativa
Lsat_1_v5_gn_4_165921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 336581805-336586804 Lactuca sativa
Lsat_1_v5_gn_4_165921 10.0kb upstream 10.0kb upstream 11884   true Lsat_1_v8_lg_4: 336569921-336581804 Lactuca sativa
Lsat_1_v5_gn_4_165921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 336569921-336579920 Lactuca sativa
Lsat_1_v5_gn_4_165921 10.0kb downstream 10.0kb downstream 11884   true Lsat_1_v8_lg_4: 336579921-336591804 Lactuca sativa
Lsat_1_v5_gn_4_165921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 336581805-336591804 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478456 5263 Asterids View MSA
123741072 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain