Gene : Lsat_1_v5_gn_4_46020 L. sativa V8
Defline:  (1 of 1) PTHR22870:SF138 - REGULATOR OF CHROMOSOME CONDENSATION DOMAIN-CONTAINING PROTEIN Genomic Order:  1389
Name:  ? Lsat_1_v5_gn_4_46020 Secondary Identifier:  ? PAC:38934304
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_46020 0.5kb upstream 0.5kb upstream 2981   true Lsat_1_v8_lg_4: 68039726-68042706 Lactuca sativa
Lsat_1_v5_gn_4_46020 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 68042207-68042706 Lactuca sativa
Lsat_1_v5_gn_4_46020 0.5kb downstream 0.5kb downstream 2981   true Lsat_1_v8_lg_4: 68039226-68042206 Lactuca sativa
Lsat_1_v5_gn_4_46020 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 68039226-68039725 Lactuca sativa
Lsat_1_v5_gn_4_46020 1.0kb upstream 1.0kb upstream 3481   true Lsat_1_v8_lg_4: 68039726-68043206 Lactuca sativa
Lsat_1_v5_gn_4_46020 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 68042207-68043206 Lactuca sativa
Lsat_1_v5_gn_4_46020 1.0kb downstream 1.0kb downstream 3481   true Lsat_1_v8_lg_4: 68038726-68042206 Lactuca sativa
Lsat_1_v5_gn_4_46020 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 68038726-68039725 Lactuca sativa
Lsat_1_v5_gn_4_46020 2.0kb upstream 2.0kb upstream 4481   true Lsat_1_v8_lg_4: 68039726-68044206 Lactuca sativa
Lsat_1_v5_gn_4_46020 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 68042207-68044206 Lactuca sativa
Lsat_1_v5_gn_4_46020 2.0kb downstream 2.0kb downstream 4481   true Lsat_1_v8_lg_4: 68037726-68042206 Lactuca sativa
Lsat_1_v5_gn_4_46020 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 68037726-68039725 Lactuca sativa
Lsat_1_v5_gn_4_46020 5.0kb upstream 5.0kb upstream 7481   true Lsat_1_v8_lg_4: 68039726-68047206 Lactuca sativa
Lsat_1_v5_gn_4_46020 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 68042207-68047206 Lactuca sativa
Lsat_1_v5_gn_4_46020 5.0kb downstream 5.0kb downstream 7481   true Lsat_1_v8_lg_4: 68034726-68042206 Lactuca sativa
Lsat_1_v5_gn_4_46020 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 68034726-68039725 Lactuca sativa
Lsat_1_v5_gn_4_46020 10.0kb upstream 10.0kb upstream 12481   true Lsat_1_v8_lg_4: 68039726-68052206 Lactuca sativa
Lsat_1_v5_gn_4_46020 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 68042207-68052206 Lactuca sativa
Lsat_1_v5_gn_4_46020 10.0kb downstream 10.0kb downstream 12481   true Lsat_1_v8_lg_4: 68029726-68042206 Lactuca sativa
Lsat_1_v5_gn_4_46020 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 68029726-68039725 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467908 5263 Asterids View MSA
123750397 5271 Pentapetalae View MSA
122786735 5272 Eudicot View MSA
122049165 5273 Angiosperm View MSA
121344608 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain