Gene : Lsat_1_v5_gn_4_49720 L. sativa V8

Defline:  (1 of 11) 3.4.22.33 - Fruit bromelain Genomic Order:  1480
Name:  ? Lsat_1_v5_gn_4_49720 Secondary Identifier:  ? PAC:38933953

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_49720 0.5kb upstream 0.5kb upstream 1717   true Lsat_1_v8_lg_4: 73939369-73941085 Lactuca sativa
Lsat_1_v5_gn_4_49720 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 73940586-73941085 Lactuca sativa
Lsat_1_v5_gn_4_49720 0.5kb downstream 0.5kb downstream 1717   true Lsat_1_v8_lg_4: 73938869-73940585 Lactuca sativa
Lsat_1_v5_gn_4_49720 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 73938869-73939368 Lactuca sativa
Lsat_1_v5_gn_4_49720 1.0kb upstream 1.0kb upstream 2217   true Lsat_1_v8_lg_4: 73939369-73941585 Lactuca sativa
Lsat_1_v5_gn_4_49720 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 73940586-73941585 Lactuca sativa
Lsat_1_v5_gn_4_49720 1.0kb downstream 1.0kb downstream 2217   true Lsat_1_v8_lg_4: 73938369-73940585 Lactuca sativa
Lsat_1_v5_gn_4_49720 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 73938369-73939368 Lactuca sativa
Lsat_1_v5_gn_4_49720 2.0kb upstream 2.0kb upstream 3217   true Lsat_1_v8_lg_4: 73939369-73942585 Lactuca sativa
Lsat_1_v5_gn_4_49720 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 73940586-73942585 Lactuca sativa
Lsat_1_v5_gn_4_49720 2.0kb downstream 2.0kb downstream 3217   true Lsat_1_v8_lg_4: 73937369-73940585 Lactuca sativa
Lsat_1_v5_gn_4_49720 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 73937369-73939368 Lactuca sativa
Lsat_1_v5_gn_4_49720 5.0kb upstream 5.0kb upstream 6217   true Lsat_1_v8_lg_4: 73939369-73945585 Lactuca sativa
Lsat_1_v5_gn_4_49720 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 73940586-73945585 Lactuca sativa
Lsat_1_v5_gn_4_49720 5.0kb downstream 5.0kb downstream 6217   true Lsat_1_v8_lg_4: 73934369-73940585 Lactuca sativa
Lsat_1_v5_gn_4_49720 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 73934369-73939368 Lactuca sativa
Lsat_1_v5_gn_4_49720 10.0kb upstream 10.0kb upstream 11217   true Lsat_1_v8_lg_4: 73939369-73950585 Lactuca sativa
Lsat_1_v5_gn_4_49720 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 73940586-73950585 Lactuca sativa
Lsat_1_v5_gn_4_49720 10.0kb downstream 10.0kb downstream 11217   true Lsat_1_v8_lg_4: 73929369-73940585 Lactuca sativa
Lsat_1_v5_gn_4_49720 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 73929369-73939368 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031130 5273 Angiosperm View MSA
121453505 5263 Asterids View MSA
123756085 5271 Pentapetalae View MSA
122777267 5272 Eudicot View MSA
121300222 5274 Embryophyte View MSA
123426788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain