Gene : Lsat_1_v5_gn_4_52761 L. sativa V8
Defline:  (1 of 1) K03144 - transcription initiation factor TFIIH subunit 4 (TFIIH4, GTF2H4, TFB2) Genomic Order:  1585
Name:  ? Lsat_1_v5_gn_4_52761 Secondary Identifier:  ? PAC:38933275
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_52761 0.5kb upstream 0.5kb upstream 5212   true Lsat_1_v8_lg_4: 79313750-79318961 Lactuca sativa
Lsat_1_v5_gn_4_52761 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 79313750-79314249 Lactuca sativa
Lsat_1_v5_gn_4_52761 0.5kb downstream 0.5kb downstream 5212   true Lsat_1_v8_lg_4: 79314250-79319461 Lactuca sativa
Lsat_1_v5_gn_4_52761 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 79318962-79319461 Lactuca sativa
Lsat_1_v5_gn_4_52761 1.0kb upstream 1.0kb upstream 5712   true Lsat_1_v8_lg_4: 79313250-79318961 Lactuca sativa
Lsat_1_v5_gn_4_52761 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 79313250-79314249 Lactuca sativa
Lsat_1_v5_gn_4_52761 1.0kb downstream 1.0kb downstream 5712   true Lsat_1_v8_lg_4: 79314250-79319961 Lactuca sativa
Lsat_1_v5_gn_4_52761 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 79318962-79319961 Lactuca sativa
Lsat_1_v5_gn_4_52761 2.0kb upstream 2.0kb upstream 6712   true Lsat_1_v8_lg_4: 79312250-79318961 Lactuca sativa
Lsat_1_v5_gn_4_52761 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 79312250-79314249 Lactuca sativa
Lsat_1_v5_gn_4_52761 2.0kb downstream 2.0kb downstream 6712   true Lsat_1_v8_lg_4: 79314250-79320961 Lactuca sativa
Lsat_1_v5_gn_4_52761 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 79318962-79320961 Lactuca sativa
Lsat_1_v5_gn_4_52761 5.0kb upstream 5.0kb upstream 9712   true Lsat_1_v8_lg_4: 79309250-79318961 Lactuca sativa
Lsat_1_v5_gn_4_52761 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 79309250-79314249 Lactuca sativa
Lsat_1_v5_gn_4_52761 5.0kb downstream 5.0kb downstream 9712   true Lsat_1_v8_lg_4: 79314250-79323961 Lactuca sativa
Lsat_1_v5_gn_4_52761 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 79318962-79323961 Lactuca sativa
Lsat_1_v5_gn_4_52761 10.0kb upstream 10.0kb upstream 14712   true Lsat_1_v8_lg_4: 79304250-79318961 Lactuca sativa
Lsat_1_v5_gn_4_52761 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 79304250-79314249 Lactuca sativa
Lsat_1_v5_gn_4_52761 10.0kb downstream 10.0kb downstream 14712   true Lsat_1_v8_lg_4: 79314250-79328961 Lactuca sativa
Lsat_1_v5_gn_4_52761 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 79318962-79328961 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467440 5263 Asterids View MSA
123747685 5271 Pentapetalae View MSA
122797891 5272 Eudicot View MSA
122042198 5273 Angiosperm View MSA
121346770 5274 Embryophyte View MSA
123427579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain