Gene : Lsat_1_v5_gn_4_61541 L. sativa V8
Defline:  (1 of 1) PTHR11946:SF7 - LEUCINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  1787
Name:  ? Lsat_1_v5_gn_4_61541 Secondary Identifier:  ? PAC:38929007
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa TRNA-CHARGING-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_61541 0.5kb upstream 0.5kb upstream 6001   true Lsat_1_v8_lg_4: 93641373-93647373 Lactuca sativa
Lsat_1_v5_gn_4_61541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 93646874-93647373 Lactuca sativa
Lsat_1_v5_gn_4_61541 0.5kb downstream 0.5kb downstream 6001   true Lsat_1_v8_lg_4: 93640873-93646873 Lactuca sativa
Lsat_1_v5_gn_4_61541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 93640873-93641372 Lactuca sativa
Lsat_1_v5_gn_4_61541 1.0kb upstream 1.0kb upstream 6501   true Lsat_1_v8_lg_4: 93641373-93647873 Lactuca sativa
Lsat_1_v5_gn_4_61541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 93646874-93647873 Lactuca sativa
Lsat_1_v5_gn_4_61541 1.0kb downstream 1.0kb downstream 6501   true Lsat_1_v8_lg_4: 93640373-93646873 Lactuca sativa
Lsat_1_v5_gn_4_61541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 93640373-93641372 Lactuca sativa
Lsat_1_v5_gn_4_61541 2.0kb upstream 2.0kb upstream 7501   true Lsat_1_v8_lg_4: 93641373-93648873 Lactuca sativa
Lsat_1_v5_gn_4_61541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 93646874-93648873 Lactuca sativa
Lsat_1_v5_gn_4_61541 2.0kb downstream 2.0kb downstream 7501   true Lsat_1_v8_lg_4: 93639373-93646873 Lactuca sativa
Lsat_1_v5_gn_4_61541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 93639373-93641372 Lactuca sativa
Lsat_1_v5_gn_4_61541 5.0kb upstream 5.0kb upstream 10501   true Lsat_1_v8_lg_4: 93641373-93651873 Lactuca sativa
Lsat_1_v5_gn_4_61541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 93646874-93651873 Lactuca sativa
Lsat_1_v5_gn_4_61541 5.0kb downstream 5.0kb downstream 10501   true Lsat_1_v8_lg_4: 93636373-93646873 Lactuca sativa
Lsat_1_v5_gn_4_61541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 93636373-93641372 Lactuca sativa
Lsat_1_v5_gn_4_61541 10.0kb upstream 10.0kb upstream 15501   true Lsat_1_v8_lg_4: 93641373-93656873 Lactuca sativa
Lsat_1_v5_gn_4_61541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 93646874-93656873 Lactuca sativa
Lsat_1_v5_gn_4_61541 10.0kb downstream 10.0kb downstream 15501   true Lsat_1_v8_lg_4: 93631373-93646873 Lactuca sativa
Lsat_1_v5_gn_4_61541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 93631373-93641372 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
121472970 5263 Asterids View MSA
123749958 5271 Pentapetalae View MSA
122789048 5272 Eudicot View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain