Gene : Lsat_1_v5_gn_4_6541 L. sativa V8
Defline:  (1 of 1) KOG3420 - Predicted RNA methylase Genomic Order:  190
Name:  ? Lsat_1_v5_gn_4_6541 Secondary Identifier:  ? PAC:38931558
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_6541 0.5kb upstream 0.5kb upstream 2711   true Lsat_1_v8_lg_4: 9481699-9484409 Lactuca sativa
Lsat_1_v5_gn_4_6541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 9481699-9482198 Lactuca sativa
Lsat_1_v5_gn_4_6541 0.5kb downstream 0.5kb downstream 2711   true Lsat_1_v8_lg_4: 9482199-9484909 Lactuca sativa
Lsat_1_v5_gn_4_6541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 9484410-9484909 Lactuca sativa
Lsat_1_v5_gn_4_6541 1.0kb upstream 1.0kb upstream 3211   true Lsat_1_v8_lg_4: 9481199-9484409 Lactuca sativa
Lsat_1_v5_gn_4_6541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 9481199-9482198 Lactuca sativa
Lsat_1_v5_gn_4_6541 1.0kb downstream 1.0kb downstream 3211   true Lsat_1_v8_lg_4: 9482199-9485409 Lactuca sativa
Lsat_1_v5_gn_4_6541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 9484410-9485409 Lactuca sativa
Lsat_1_v5_gn_4_6541 2.0kb upstream 2.0kb upstream 4211   true Lsat_1_v8_lg_4: 9480199-9484409 Lactuca sativa
Lsat_1_v5_gn_4_6541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 9480199-9482198 Lactuca sativa
Lsat_1_v5_gn_4_6541 2.0kb downstream 2.0kb downstream 4211   true Lsat_1_v8_lg_4: 9482199-9486409 Lactuca sativa
Lsat_1_v5_gn_4_6541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 9484410-9486409 Lactuca sativa
Lsat_1_v5_gn_4_6541 5.0kb upstream 5.0kb upstream 7211   true Lsat_1_v8_lg_4: 9477199-9484409 Lactuca sativa
Lsat_1_v5_gn_4_6541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 9477199-9482198 Lactuca sativa
Lsat_1_v5_gn_4_6541 5.0kb downstream 5.0kb downstream 7211   true Lsat_1_v8_lg_4: 9482199-9489409 Lactuca sativa
Lsat_1_v5_gn_4_6541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 9484410-9489409 Lactuca sativa
Lsat_1_v5_gn_4_6541 10.0kb upstream 10.0kb upstream 12211   true Lsat_1_v8_lg_4: 9472199-9484409 Lactuca sativa
Lsat_1_v5_gn_4_6541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 9472199-9482198 Lactuca sativa
Lsat_1_v5_gn_4_6541 10.0kb downstream 10.0kb downstream 12211   true Lsat_1_v8_lg_4: 9482199-9494409 Lactuca sativa
Lsat_1_v5_gn_4_6541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 9484410-9494409 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474258 5263 Asterids View MSA
123737429 5271 Pentapetalae View MSA
122790972 5272 Eudicot View MSA
122044343 5273 Angiosperm View MSA
121351641 5274 Embryophyte View MSA
123425114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain