Gene : Lsat_1_v5_gn_4_66660 L. sativa V8
Defline:  (1 of 2) PTHR31451//PTHR31451:SF1 - FAMILY NOT NAMED // MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Genomic Order:  1931
Name:  ? Lsat_1_v5_gn_4_66660 Secondary Identifier:  ? PAC:38933244
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_66660 0.5kb upstream 0.5kb upstream 3494   true Lsat_1_v8_lg_4: 102556400-102559893 Lactuca sativa
Lsat_1_v5_gn_4_66660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 102559394-102559893 Lactuca sativa
Lsat_1_v5_gn_4_66660 0.5kb downstream 0.5kb downstream 3494   true Lsat_1_v8_lg_4: 102555900-102559393 Lactuca sativa
Lsat_1_v5_gn_4_66660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 102555900-102556399 Lactuca sativa
Lsat_1_v5_gn_4_66660 1.0kb upstream 1.0kb upstream 3994   true Lsat_1_v8_lg_4: 102556400-102560393 Lactuca sativa
Lsat_1_v5_gn_4_66660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 102559394-102560393 Lactuca sativa
Lsat_1_v5_gn_4_66660 1.0kb downstream 1.0kb downstream 3994   true Lsat_1_v8_lg_4: 102555400-102559393 Lactuca sativa
Lsat_1_v5_gn_4_66660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 102555400-102556399 Lactuca sativa
Lsat_1_v5_gn_4_66660 2.0kb upstream 2.0kb upstream 4994   true Lsat_1_v8_lg_4: 102556400-102561393 Lactuca sativa
Lsat_1_v5_gn_4_66660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 102559394-102561393 Lactuca sativa
Lsat_1_v5_gn_4_66660 2.0kb downstream 2.0kb downstream 4994   true Lsat_1_v8_lg_4: 102554400-102559393 Lactuca sativa
Lsat_1_v5_gn_4_66660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 102554400-102556399 Lactuca sativa
Lsat_1_v5_gn_4_66660 5.0kb upstream 5.0kb upstream 7994   true Lsat_1_v8_lg_4: 102556400-102564393 Lactuca sativa
Lsat_1_v5_gn_4_66660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 102559394-102564393 Lactuca sativa
Lsat_1_v5_gn_4_66660 5.0kb downstream 5.0kb downstream 7994   true Lsat_1_v8_lg_4: 102551400-102559393 Lactuca sativa
Lsat_1_v5_gn_4_66660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 102551400-102556399 Lactuca sativa
Lsat_1_v5_gn_4_66660 10.0kb upstream 10.0kb upstream 12994   true Lsat_1_v8_lg_4: 102556400-102569393 Lactuca sativa
Lsat_1_v5_gn_4_66660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 102559394-102569393 Lactuca sativa
Lsat_1_v5_gn_4_66660 10.0kb downstream 10.0kb downstream 12994   true Lsat_1_v8_lg_4: 102546400-102559393 Lactuca sativa
Lsat_1_v5_gn_4_66660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 102546400-102556399 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471868 5263 Asterids View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain