Gene : Lsat_1_v5_gn_4_6581 L. sativa V8
Defline:  (1 of 4) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) Genomic Order:  189
Name:  ? Lsat_1_v5_gn_4_6581 Secondary Identifier:  ? PAC:38930154
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_6581 0.5kb upstream 0.5kb upstream 2110   true Lsat_1_v8_lg_4: 9470179-9472288 Lactuca sativa
Lsat_1_v5_gn_4_6581 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 9470179-9470678 Lactuca sativa
Lsat_1_v5_gn_4_6581 0.5kb downstream 0.5kb downstream 2110   true Lsat_1_v8_lg_4: 9470679-9472788 Lactuca sativa
Lsat_1_v5_gn_4_6581 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 9472289-9472788 Lactuca sativa
Lsat_1_v5_gn_4_6581 1.0kb upstream 1.0kb upstream 2610   true Lsat_1_v8_lg_4: 9469679-9472288 Lactuca sativa
Lsat_1_v5_gn_4_6581 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 9469679-9470678 Lactuca sativa
Lsat_1_v5_gn_4_6581 1.0kb downstream 1.0kb downstream 2610   true Lsat_1_v8_lg_4: 9470679-9473288 Lactuca sativa
Lsat_1_v5_gn_4_6581 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 9472289-9473288 Lactuca sativa
Lsat_1_v5_gn_4_6581 2.0kb upstream 2.0kb upstream 3610   true Lsat_1_v8_lg_4: 9468679-9472288 Lactuca sativa
Lsat_1_v5_gn_4_6581 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 9468679-9470678 Lactuca sativa
Lsat_1_v5_gn_4_6581 2.0kb downstream 2.0kb downstream 3610   true Lsat_1_v8_lg_4: 9470679-9474288 Lactuca sativa
Lsat_1_v5_gn_4_6581 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 9472289-9474288 Lactuca sativa
Lsat_1_v5_gn_4_6581 5.0kb upstream 5.0kb upstream 6610   true Lsat_1_v8_lg_4: 9465679-9472288 Lactuca sativa
Lsat_1_v5_gn_4_6581 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 9465679-9470678 Lactuca sativa
Lsat_1_v5_gn_4_6581 5.0kb downstream 5.0kb downstream 6610   true Lsat_1_v8_lg_4: 9470679-9477288 Lactuca sativa
Lsat_1_v5_gn_4_6581 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 9472289-9477288 Lactuca sativa
Lsat_1_v5_gn_4_6581 10.0kb upstream 10.0kb upstream 11610   true Lsat_1_v8_lg_4: 9460679-9472288 Lactuca sativa
Lsat_1_v5_gn_4_6581 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 9460679-9470678 Lactuca sativa
Lsat_1_v5_gn_4_6581 10.0kb downstream 10.0kb downstream 11610   true Lsat_1_v8_lg_4: 9470679-9482288 Lactuca sativa
Lsat_1_v5_gn_4_6581 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 9472289-9482288 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467064 5263 Asterids View MSA
123752021 5271 Pentapetalae View MSA
122793391 5272 Eudicot View MSA
122044572 5273 Angiosperm View MSA
121347059 5274 Embryophyte View MSA
123424632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain